RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 KRT77Q7Z794 578 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 SCCPDHQ8NBX0 429 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 BBS1Q8NFJ9 593 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 FAM81AQ8TBF8 368 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 TAF15Q92804 592 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 HIST1H2AAQ96QV6 131 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 ZNF696Q9H7X3 374 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 ACOXLQ9NUZ1 547 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 DNAJB11Q9UBS4 358 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 FAM181BA6NEQ2 426 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 GPR37O15354 613 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 FCN3O75636 299 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 MELTFP08582 738 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 ALOX5APP20292 161 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 MDKP21741 143 aaPredicted RBP13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 OMGP23515 440 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 ACKR3P25106 362 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 GMFBP60983 142 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 IKZF1Q13422 519 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 SNAPC1Q16533 368 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 CDONQ4KMG0 1287 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 LRRC10Q5BKY1 277 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 TMEM236Q5W0B7 351 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 FIP1L1Q6UN15 594 aaKnown RBP13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 ZDHHC23Q8IYP9 409 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 CMTM4Q8IZR5 234 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 FAM216BQ8N7L0 139 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 OR8B12Q8NGG6 310 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 OR10Z1Q8NGY1 313 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 SSMEM1Q8WWF3 244 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 DNAJC9Q8WXX5 260 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 OR5P3Q8WZ94 311 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 PIGCQ92535 297 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 RPL3LQ92901 407 aaKnown RBP13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 RNF170Q96K19 258 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 LYZL4Q96KX0 146 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 PKP2Q99959 881 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 YIPF3Q9GZM5 350 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 SLITRK2Q9H156 845 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 SLC25A19Q9HC21 320 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 HAO2Q9NYQ3 351 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 TVP23BQ9NYZ1 205 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 ONECUT1Q9UBC0 465 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 KLHDC2Q9Y2U9 406 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 LRP12Q9Y561 859 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 KPTNQ9Y664 436 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 POMT1Q9Y6A1 747 aa13.37□□□□□ -0.27
CLSTN3-204ENST00000535313 A0A1B0GUS0 222 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 A0A1B0GW55 424 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 TCRBV3S1A0A5B6 114 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 NKX6-3A6NJ46 265 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 DUX4L2P0CJ85 424 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 DUX4L3P0CJ86 424 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 DUX4L4P0CJ87 422 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 DUX4L5P0CJ88 424 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 DUX4L6P0CJ89 424 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 DUX4L7P0CJ90 424 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 SLC2A5P22732 501 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 ELF3P78545 371 aaPredicted RBP13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 APOFQ13790 326 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 KCTD18Q6PI47 426 aaPredicted RBP13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 DEGS2Q6QHC5 323 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 DUX4L9Q6RFH8 374 aaPredicted RBP13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 FGFRL1Q8N441 504 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 OR5T2Q8NGG2 359 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 OR4F5Q8NH21 305 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 TBC1D15Q8TC07 691 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 SEH1LQ96EE3 360 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 NRBF2Q96F24 287 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 CADM1Q9BY67 442 aaKnown RBP13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 MROQ9BYG7 248 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 CHIAQ9BZP6 476 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 BEX1Q9HBH7 125 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 PAPOLBQ9NRJ5 636 aaKnown RBP13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 DUX4Q9UBX2 424 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 MMP24Q9Y5R2 645 aa13.36□□□□□ -0.27
CLSTN3-204ENST00000535313 ZNF816-ZNF321PA0A0X1KG74 233 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 A0A1B0GVI7 797 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 ACOD1A6NK06 481 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 MAP2K3P46734 347 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 TGM4P49221 684 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 HCCSP53701 268 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 CRISP1P54107 249 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 RAG2P55895 527 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 FAM76BQ5HYJ3 339 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 ATPAF1Q5TC12 328 aaPredicted RBP13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 LCN1P1Q5VSP4 162 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 STUMQ69YW2 141 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 VMO1Q7Z5L0 202 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 COMMD2Q86X83 199 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 PDZD9Q8IXQ8 264 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 PAPD5Q8NDF8 572 aaKnown RBP13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 LY6G5BQ8NDX9 201 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 DMRTB1Q96MA1 342 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 RAB3IPQ96QF0 476 aaPredicted RBP13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 DNTTIP1Q9H147 329 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 WDR13Q9H1Z4 485 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 SNTG1Q9NSN8 517 aa13.35□□□□□ -0.27
CLSTN3-204ENST00000535313 POMPQ9Y244 141 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms