RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 ATPAF1Q5TC12 328 aaPredicted RBP8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 GPR157Q5UAW9 335 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 PLBD1Q6P4A8 553 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 DUX4L9Q6RFH8 374 aaPredicted RBP8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 BTN2A1Q7KYR7 527 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 TRPM8Q7Z2W7 1104 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 CPOQ8IVL8 374 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 FGFRL1Q8N441 504 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 GALNT4Q8N4A0 578 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 BOLLQ8N9W6 283 aaKnown RBP8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 PNLDC1Q8NA58 520 aaKnown RBP8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 BBS1Q8NFJ9 593 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 OR8S1Q8NH09 359 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 THEM6Q8WUY1 208 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 LRRC29Q8WV35 223 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 C12orf43Q96C57 262 aaKnown RBP8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 MMADHCQ9H3L0 296 aaPredicted RBP8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 NOX4Q9NPH5 578 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 TNFRSF19Q9NS68 423 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 DUX4Q9UBX2 424 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 KLHDC2Q9Y2U9 406 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 MPC1Q9Y5U8 109 aa8.3□□□□□ -1.08
CLSTN3-203ENST00000534830 IGHV3OR15-7A0A075B7D8 119 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 hCG_1807616A0A1W2PRN6 198 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 FAM181BA6NEQ2 426 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 CCDC182A6NF36 153 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 GNGT2O14610 69 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 CDIPTO14735 213 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 HOXA3O43365 443 aaPredicted RBP8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 FKBP6O75344 327 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 IGLV3-1P01715 115 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 POU1F1P28069 291 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 EFNB1P98172 346 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 IL5RAQ01344 420 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 PDCD1Q15116 288 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 SNCBQ16143 134 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 TAF9Q16594 264 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 MICBQ29980 383 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 WDR38Q5JTN6 314 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 TMEM236Q5W0B7 351 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 RUSC1-AS1Q66K80 236 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 STUMQ69YW2 141 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 DEGS2Q6QHC5 323 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 TMEM86BQ8N661 226 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 OR8B12Q8NGG6 310 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 OR10Z1Q8NGY1 313 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 HPSE2Q8WWQ2 592 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 OR5P3Q8WZ94 311 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 ITFG2Q969R8 447 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 UTP4Q969X6 686 aaKnown RBP8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 OTULINQ96BN8 352 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 SEH1LQ96EE3 360 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 NRBF2Q96F24 287 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 PGAM5Q96HS1 289 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 TEAD3Q99594 435 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 PCGF1Q9BSM1 259 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 NIPAL2Q9H841 368 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 CNTD2Q9H8S5 307 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 BRD7Q9NPI1 651 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 DNAJB9Q9UBS3 223 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 RPUSD1Q9UJJ7 312 aaKnown RBP8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 ZNF391Q9UJN7 358 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 POMPQ9Y244 141 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 LRP12Q9Y561 859 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 KPTNQ9Y664 436 aa8.29□□□□□ -1.08
CLSTN3-203ENST00000534830 IGHV1-69DA0A0B4J2H0 117 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 A0A0U1RQV5 110 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 CLPSL1A2RUU4 121 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 ACOD1A6NK06 481 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 TMEM210A6NLX4 147 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 ZNF850A8MQ14 1090 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 PRR32B1ATL7 298 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 G3V4G9 280 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 GPR37O15354 613 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 IGHV1-69P01742 117 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 MELTFP08582 738 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 NAA10P41227 235 aaPredicted RBP8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 DAPP51397 102 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 HCCSP53701 268 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 CRISP1P54107 249 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 KRTAP10-3P60369 221 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 PSMA6P60900 246 aaKnown RBP8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 ARF6P62330 175 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 CBX1P83916 185 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 RELBQ01201 579 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 PRDX4Q13162 271 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 FLOT2Q14254 428 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 FAM189A2Q15884 450 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 BEAN1Q3B7T3 259 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 DNAL1Q4LDG9 190 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 VAX1Q5SQQ9 334 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 METTL11BQ5VVY1 283 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 FAHD1Q6P587 224 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 METAP1DQ6UB28 335 aaPredicted RBP8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 C8orf46Q8TAG6 207 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 MRAPQ8TCY5 172 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 GATAD2BQ8WXI9 593 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 DNAJC9Q8WXX5 260 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 RPL3LQ92901 407 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms