RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CHN2P52757 468 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 ST3GAL4Q11206 333 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 ALKBH1Q13686 389 aaKnown RBP11.79□□□□□ -0.52
VPS11-205ENST00000534551 ZMYND11Q15326 602 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 PLCXD3Q63HM9 321 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 DOK3Q7L591 496 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 BIVMQ86UB2 503 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 KLBQ86Z14 1044 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 SYS1Q8N2H4 156 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 ZFP41Q8N8Y5 198 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 BOLLQ8N9W6 283 aaKnown RBP11.79□□□□□ -0.52
VPS11-205ENST00000534551 NPRL2Q8WTW4 380 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 RPL3LQ92901 407 aaKnown RBP11.79□□□□□ -0.52
VPS11-205ENST00000534551 TMEM80Q96HE8 168 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 PDCD1LG2Q9BQ51 273 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 SLC22A4Q9H015 551 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 LPAR2Q9HBW0 351 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 FKBP14Q9NWM8 211 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 C1orf123Q9NWV4 160 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 UBAP1Q9NZ09 502 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 NPTNQ9Y639 398 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 SIRT4Q9Y6E7 314 aaPredicted RBP11.79□□□□□ -0.52
VPS11-205ENST00000534551 DOCK11Q5JSL3 2073 aa11.79□□□□□ -0.52
VPS11-205ENST00000534551 NSD1Q96L73 2696 aaPredicted RBP11.78□□□□□ -0.52
VPS11-205ENST00000534551 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.78□□□□□ -0.52
VPS11-205ENST00000534551 hCG_1807616A0A1W2PRN6 198 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 PTBP3O95758 552 aaKnown RBP11.78□□□□□ -0.52
VPS11-205ENST00000534551 HEXAP06865 529 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 UBCP0CG48 685 aaKnown RBP11.78□□□□□ -0.52
VPS11-205ENST00000534551 PIPP12273 146 aaPredicted RBP11.78□□□□□ -0.52
VPS11-205ENST00000534551 MYL12AP19105 171 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 DCKP27707 260 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 GPM6AP51674 278 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 TMEM33P57088 247 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 SEC61A1P61619 476 aaKnown RBP11.78□□□□□ -0.52
VPS11-205ENST00000534551 BTG1P62324 171 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 RIPPLY1Q0D2K3 151 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 C6orf141Q5SZD1 244 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 FDX2Q6P4F2 183 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 Q6ZSR3 168 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 KCTD8Q6ZWB6 473 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 MOB3CQ70IA8 216 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 C11orf53Q8IXP5 236 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 ZNF540Q8NDQ6 660 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 OR1M1Q8NGA1 313 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 OR5P3Q8WZ94 311 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 RGP1Q92546 391 aaPredicted RBP11.78□□□□□ -0.52
VPS11-205ENST00000534551 ADAT3Q96EY9 351 aaPredicted RBP11.78□□□□□ -0.52
VPS11-205ENST00000534551 GAL3ST1Q99999 423 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 ENPP5Q9UJA9 477 aa11.78□□□□□ -0.52
VPS11-205ENST00000534551 EXOSC1Q9Y3B2 195 aaKnown RBP11.78□□□□□ -0.52
VPS11-205ENST00000534551 NOP16Q9Y3C1 178 aaKnown RBP11.78□□□□□ -0.52
VPS11-205ENST00000534551 IGHV3OR15-7A0A075B7D8 119 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 PNMA8CA0A1B0GUJ8 204 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 IRGMA1A4Y4 181 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 EFCAB10A6NFE3 127 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 ANXA2P2A6NMY6 339 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 RRP9O43818 475 aaKnown RBP11.77□□□□□ -0.53
VPS11-205ENST00000534551 ZFPL1O95159 310 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 GMFBP60983 142 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 LMO4P61968 165 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 SFRP4Q6FHJ7 346 aaPredicted RBP11.77□□□□□ -0.53
VPS11-205ENST00000534551 BATF2Q8N1L9 274 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 STX19Q8N4C7 294 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 FTMTQ8N4E7 242 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 KLHL36Q8N4N3 616 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 CELF2-AS1Q8N7Q2 184 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 OR13C5Q8NGS8 318 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 TRMT10AQ8TBZ6 339 aaKnown RBP11.77□□□□□ -0.53
VPS11-205ENST00000534551 Q8TCH9 128 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 GATAD2BQ8WXI9 593 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 MSI2Q96DH6 328 aaKnown RBP11.77□□□□□ -0.53
VPS11-205ENST00000534551 SEH1LQ96EE3 360 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 MRPL48Q96GC5 212 aaKnown RBP11.77□□□□□ -0.53
VPS11-205ENST00000534551 TIMD4Q96H15 378 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 RNF170Q96K19 258 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 MICU1Q9BPX6 476 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 RTL8AQ9BWD3 113 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 FN3KRPQ9HA64 309 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 PLEKHA1Q9HB21 404 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 PLCXD1Q9NUJ7 323 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 CNOT2Q9NZN8 540 aaKnown RBP11.77□□□□□ -0.53
VPS11-205ENST00000534551 ERVK-18Q9QC07 812 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 MPC1Q9Y5U8 109 aa11.77□□□□□ -0.53
VPS11-205ENST00000534551 WNK2Q9Y3S1 2297 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 ZNF732B4DXR9 585 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 PTGES3LE9PB15 166 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 CD5LO43866 347 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 MTRF1O75570 445 aaKnown RBP11.76□□□□□ -0.53
VPS11-205ENST00000534551 IGHV2-5P01817 119 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 TFF1P04155 84 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 ATP6V1B1P15313 513 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 HSPA13P48723 471 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 GBX2P52951 348 aaPredicted RBP11.76□□□□□ -0.53
VPS11-205ENST00000534551 SLC3A1Q07837 685 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 CDK5R1Q15078 307 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 TMEM42Q69YG0 159 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 WDR82Q6UXN9 313 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 KCTD20Q7Z5Y7 419 aa11.76□□□□□ -0.53
VPS11-205ENST00000534551 ZNF676Q8N7Q3 588 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms