RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 OR5AC2Q9NZP5 309 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 CPAMD8Q8IZJ3 1885 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 C5orf63A6NC05 138 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 H3BMH7 237 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 DUS4LO95620 317 aaKnown RBP17.1■□□□□ 0.33
CAPN1-226ENST00000533820 IL2RAP01589 272 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 ZNF14P17017 642 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-226ENST00000533820 RAB6AP20340 208 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 SFTPDP35247 375 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 RNASE11Q8TAA1 199 aaKnown RBP17.1■□□□□ 0.33
CAPN1-226ENST00000533820 PIK3IP1Q96FE7 263 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 MARS2Q96GW9 593 aaKnown RBP17.1■□□□□ 0.33
CAPN1-226ENST00000533820 ARHGAP5-AS1Q96IT6 56 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 SUCNR1Q9BXA5 334 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 GPR84Q9NQS5 396 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 SERINC1Q9NRX5 453 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 ZNF705EA8MWA4 302 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-226ENST00000533820 EFNA2O43921 213 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 FARS2O95363 451 aaKnown RBP17.1■□□□□ 0.33
CAPN1-226ENST00000533820 HOXB5P09067 269 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 S100A10P60903 97 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 USF2Q15853 346 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-226ENST00000533820 ZNF585AQ6P3V2 769 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 ZDHHC22Q8N966 263 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 C14orf79Q96F83 325 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 MISP3Q96FF7 219 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 PIGQQ9BRB3 760 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 RNF126Q9BV68 326 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 LPAR5Q9H1C0 372 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 METTL8Q9H825 291 aaKnown RBP17.1■□□□□ 0.33
CAPN1-226ENST00000533820 SLC2A8Q9NY64 477 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 NCOA6Q14686 2063 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-226ENST00000533820 CLRN1P58418 232 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 C14orf28Q4W4Y0 310 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 TCTEX1D2Q8WW35 142 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 NAA11Q9BSU3 229 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-226ENST00000533820 CHRDQ9H2X0 955 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 C5orf66Q9H5L9 145 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 ELL3Q9HB65 397 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-226ENST00000533820 WASF3Q9UPY6 502 aa17.1■□□□□ 0.33
CAPN1-226ENST00000533820 IGHV1OR15-9A0A0B4J2B8 117 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 BPNT1O95861 308 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 KNG1P01042 644 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 IGHMP01871 453 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 SMAD4Q13485 552 aaKnown RBP17.09■□□□□ 0.33
CAPN1-226ENST00000533820 PHF19Q5T6S3 580 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 ETV3LQ6ZN32 361 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 FAM57BQ71RH2 274 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 TERB2Q8NHR7 220 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 PRO1933Q9H354 126 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 ACKR4Q9NPB9 350 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 VSTM2BA6NLU5 285 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 ADAM10O14672 748 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 RAMP1O60894 148 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 ZNF121P58317 390 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-226ENST00000533820 MISPQ8IVT2 679 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 BAP18Q8IXM2 172 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 STT3BQ8TCJ2 826 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 LIN37Q96GY3 246 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-226ENST00000533820 ZNF629Q9UEG4 869 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-226ENST00000533820 LHFPL6Q9Y693 200 aa17.09■□□□□ 0.33
CAPN1-226ENST00000533820 GLRA1P23415 457 aa17.08■□□□□ 0.33
CAPN1-226ENST00000533820 DHPSP49366 369 aaPredicted RBP17.08■□□□□ 0.33
CAPN1-226ENST00000533820 MYBPHQ13203 477 aa17.08■□□□□ 0.33
CAPN1-226ENST00000533820 CLEC18BQ6UXF7 455 aa17.08■□□□□ 0.33
CAPN1-226ENST00000533820 OR2AJ1Q8NGZ0 328 aa17.08■□□□□ 0.33
CAPN1-226ENST00000533820 IGHV1OR21-1A0A087WYE8 117 aa17.08■□□□□ 0.32
CAPN1-226ENST00000533820 BTBD17A6NE02 478 aa17.08■□□□□ 0.32
CAPN1-226ENST00000533820 COLCA2A8K830 154 aa17.08■□□□□ 0.32
CAPN1-226ENST00000533820 SFTPBP07988 381 aa17.08■□□□□ 0.32
CAPN1-226ENST00000533820 TMEM50BP56557 158 aa17.08■□□□□ 0.32
CAPN1-226ENST00000533820 OR8B12Q8NGG6 310 aa17.08■□□□□ 0.32
CAPN1-226ENST00000533820 TMEM59Q9BXS4 323 aa17.08■□□□□ 0.32
CAPN1-226ENST00000533820 PARP12Q9H0J9 701 aaKnown RBP17.08■□□□□ 0.32
CAPN1-226ENST00000533820 ZNF814B7Z6K7 855 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 OR8U8P0C7N1 319 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 TPT1P13693 172 aaKnown RBP17.07■□□□□ 0.32
CAPN1-226ENST00000533820 AMY2BP19961 511 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 SRSF4Q08170 494 aaKnown RBP17.07■□□□□ 0.32
CAPN1-226ENST00000533820 HOGA1Q86XE5 327 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 ZNF441Q8N8Z8 693 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 MFSD8Q8NHS3 518 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 TMEM230Q96A57 120 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 PTX4Q96A99 478 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 OR10C1Q96KK4 312 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 NEU1Q99519 415 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 A0A1B0GX78 115 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 CD37P11049 281 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 DCDP81605 110 aaKnown RBP17.07■□□□□ 0.32
CAPN1-226ENST00000533820 ANKRD55Q3KP44 614 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 PGAP1Q75T13 922 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 OIT3Q8WWZ8 545 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 PHYHIPLQ96FC7 376 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 OR5B2Q96R09 309 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 ZNF205O95201 554 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 ADH6P28332 368 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 OR3A2P47893 321 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 PRSS12P56730 875 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 C17orf67Q0P5P2 114 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 C1QL2Q7Z5L3 287 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms