RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 MAGT1Q9H0U3 335 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF275Q9NSD4 429 aaPredicted RBP15.67■□□□□ 0.1
PHRF1-205ENST00000533464 NSG2Q9Y328 171 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 IGHA1P01876 353 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF32P17041 273 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 FUT3P21217 361 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 EMP3P54852 163 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 CATSPERDQ86XM0 798 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 LFNGQ8NES3 379 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 OR5M9Q8NGP3 310 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 OR10D3Q8NH80 312 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 SLC25A32Q9H2D1 315 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 PLEKHA2Q9HB19 425 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 OCIAD1Q9NX40 245 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF629Q9UEG4 869 aaPredicted RBP15.67■□□□□ 0.1
PHRF1-205ENST00000533464 CENPVL1A0A0U1RR11 272 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 DHRS3O75911 302 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 OR1J1Q8NGS3 322 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 FOXS1O43638 330 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 ST3GAL2Q16842 350 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 WDR74Q6RFH5 385 aaPredicted RBP15.67■□□□□ 0.1
PHRF1-205ENST00000533464 C20orf24Q9BUV8 137 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 SMCO4Q9NRQ5 59 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 BRWD3Q6RI45 1802 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 IL3RAP26951 378 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 PTGFRP43088 359 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 SSPNQ14714 243 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 SLC25A30Q5SVS4 291 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 OR52N4Q8NGI2 321 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 MKRN2OSH3BPM6 223 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 TAGLN2P37802 199 aaKnown RBP15.66■□□□□ 0.1
PHRF1-205ENST00000533464 GPR12P47775 334 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 PSMB3P49720 205 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 NOVA1P51513 510 aaKnown RBP15.66■□□□□ 0.1
PHRF1-205ENST00000533464 EXTL1Q92935 676 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 ATP23Q9Y6H3 246 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 SBF2Q86WG5 1849 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 A0A1W2PQD3 144 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 GSG1Q2KHT4 349 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 Q6ZRG5 221 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 WFDC8Q8IUA0 241 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 BOD1Q96IK1 185 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 DTX4Q9Y2E6 619 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF724A8MTY0 619 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 CCL4P13236 92 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 AK3Q9UIJ7 227 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 ICAM5Q9UMF0 924 aa15.66■□□□□ 0.1
PHRF1-205ENST00000533464 TERTO14746 1132 aaKnown RBP15.65■□□□□ 0.1
PHRF1-205ENST00000533464 OGG1O15527 345 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 CBR1P16152 277 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 HIST1H1DP16402 221 aaKnown RBP15.65■□□□□ 0.1
PHRF1-205ENST00000533464 CHRNB4P30926 498 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 SPEM2Q0P670 501 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 IRF3Q14653 427 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF626Q68DY1 528 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 KISS1RQ969F8 398 aaPredicted RBP15.65■□□□□ 0.1
PHRF1-205ENST00000533464 C10orf90Q96M02 699 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 TMEM231Q9H6L2 316 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 GVINP1Q7Z2Y8 2422 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 PATE4P0C8F1 98 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 ADIRFQ15847 76 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 FXNQ16595 210 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 OR2W3Q7Z3T1 314 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 S100A7AQ86SG5 101 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 FAM185AQ8N0U4 392 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 ZFP82Q8N141 532 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 ST8SIA2Q92186 375 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 AP1S3Q96PC3 154 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 TCEAL7Q9BRU2 100 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 MARVELD1Q9BSK0 173 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 KCNIP2Q9NS61 270 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 RNF150Q9ULK6 438 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 OR5H15A6NDH6 313 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 AVPI1Q5T686 147 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 TSEN54Q7Z6J9 526 aaKnown RBP15.65■□□□□ 0.1
PHRF1-205ENST00000533464 GNPNAT1Q96EK6 184 aaPredicted RBP15.65■□□□□ 0.1
PHRF1-205ENST00000533464 TECTBQ96PL2 329 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 SAMD10Q9BYL1 202 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 LHX9Q9NQ69 397 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF230Q9UIE0 474 aaPredicted RBP15.65■□□□□ 0.1
PHRF1-205ENST00000533464 R4GN57 208 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 CACNA1IQ9P0X4 2223 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 APOA2P02652 100 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 SRD5A2P31213 254 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 SKP2Q13309 424 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 C20orf196Q8IYI0 205 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 KPTNQ9Y664 436 aa15.65■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF638Q14966 1978 aaKnown RBP15.65■□□□□ 0.1
PHRF1-205ENST00000533464 TRAV17A0A0B4J275 112 aa15.64■□□□□ 0.09
PHRF1-205ENST00000533464 OR2M5A3KFT3 312 aa15.64■□□□□ 0.09
PHRF1-205ENST00000533464 ZNF705GA8MUZ8 300 aaPredicted RBP15.64■□□□□ 0.09
PHRF1-205ENST00000533464 GALNSP34059 522 aa15.64■□□□□ 0.09
PHRF1-205ENST00000533464 CD96P40200 585 aa15.64■□□□□ 0.09
PHRF1-205ENST00000533464 CD300CQ08708 224 aa15.64■□□□□ 0.09
PHRF1-205ENST00000533464 ZNF766Q5HY98 468 aa15.64■□□□□ 0.09
PHRF1-205ENST00000533464 Q7L0L9 218 aa15.64■□□□□ 0.09
PHRF1-205ENST00000533464 ADPRHL1Q8NDY3 354 aa15.64■□□□□ 0.09
PHRF1-205ENST00000533464 OR2Y1Q8NGV0 311 aa15.64■□□□□ 0.09
PHRF1-205ENST00000533464 CNTD2Q9H8S5 307 aa15.64■□□□□ 0.09
PHRF1-205ENST00000533464 CSRP3P50461 194 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms