RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 TEX30Q5JUR7 227 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 GLYATL3Q5SZD4 288 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 PRAMEF6Q5VXH4 476 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 LYPD2Q6UXB3 125 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 LRRN1Q6UXK5 716 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 ZNF841Q6ZN19 808 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 DCDC5Q6ZRR9 648 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 C9orf139Q6ZV77 190 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 AHSA2Q719I0 299 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 MRPL21Q7Z2W9 205 aaKnown RBP9.43□□□□□ -0.9
CLCF1-202ENST00000533438 ZNF511Q8NB15 262 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 OR8B3Q8NGG8 313 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 OR51G2Q8NGK0 314 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 OR2AE1Q8NHA4 323 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 SPRYD4Q8WW59 207 aaPredicted RBP9.43□□□□□ -0.9
CLCF1-202ENST00000533438 RAB40AQ8WXH6 277 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 MYDGFQ969H8 173 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 UPRTQ96BW1 309 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 SLAMF6Q96DU3 332 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 OR8B2Q96RD0 313 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 CNN2Q99439 309 aaKnown RBP9.43□□□□□ -0.9
CLCF1-202ENST00000533438 KCNJ15Q99712 375 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 COPS4Q9BT78 406 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 JAM3Q9BX67 310 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 FGF20Q9NP95 211 aaPredicted RBP9.43□□□□□ -0.9
CLCF1-202ENST00000533438 UFSP2Q9NUQ7 469 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 NOP16Q9Y3C1 178 aaKnown RBP9.43□□□□□ -0.9
CLCF1-202ENST00000533438 PCDHGB1Q9Y5G3 927 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 DNAJC9-AS1A6NH13 148 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 ZNF878C9JN71 531 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 PTGES3LE9PB15 166 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 ZNF593O00488 134 aaPredicted RBP9.42□□□□□ -0.9
CLCF1-202ENST00000533438 PHYHO14832 338 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 KCNAB3O43448 404 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 FADS2O95864 444 aaKnown RBP9.42□□□□□ -0.9
CLCF1-202ENST00000533438 IGHA1P01876 353 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 CDK1P06493 297 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 IGHV4-38-2P0DP08 117 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 IRF2P14316 349 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 PRTN3P24158 256 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 DCKP27707 260 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 ATP6V1E1P36543 226 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 PITPNBP48739 271 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 HOXA4Q00056 320 aaPredicted RBP9.42□□□□□ -0.9
CLCF1-202ENST00000533438 ST3GAL4Q11206 333 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 RNLSQ5VYX0 342 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 WDR25Q64LD2 544 aaPredicted RBP9.42□□□□□ -0.9
CLCF1-202ENST00000533438 BTNL3Q6UXE8 466 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 NLRC3Q7RTR2 1065 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 SLC16A9Q7RTY1 509 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 PRSS48Q7RTY5 328 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 C3orf56Q8N813 242 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 PLPP7Q8NBV4 271 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 C19orf18Q8NEA5 215 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 OR52I1Q8NGK6 324 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 OR11L1Q8NGX0 322 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 SPSB4Q96A44 273 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 TMEM80Q96HE8 168 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 INTS14Q96SY0 518 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 MNTQ99583 582 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 NUDT16L1Q9BRJ7 211 aaKnown RBP9.42□□□□□ -0.9
CLCF1-202ENST00000533438 ADAT1Q9BUB4 502 aaKnown RBP9.42□□□□□ -0.9
CLCF1-202ENST00000533438 YIPF3Q9GZM5 350 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 OPA3Q9H6K4 179 aa9.42□□□□□ -0.9
CLCF1-202ENST00000533438 ZMAT3Q9HA38 289 aaKnown RBP9.42□□□□□ -0.9
CLCF1-202ENST00000533438 MRPL15Q9P015 296 aaKnown RBP9.42□□□□□ -0.9
CLCF1-202ENST00000533438 DIMT1Q9UNQ2 313 aaKnown RBP9.42□□□□□ -0.9
CLCF1-202ENST00000533438 KIR2DS1A0A191URI9 304 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 MAGEA13PA6NCF6 341 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 TNFRSF13BO14836 293 aaPredicted RBP9.41□□□□□ -0.9
CLCF1-202ENST00000533438 RGS10O43665 173 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 SELENOFO60613 162 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 APOL3O95236 402 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 HTR1AP08908 422 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 MRPL3P09001 348 aaKnown RBP9.41□□□□□ -0.9
CLCF1-202ENST00000533438 SPARCP09486 303 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 OR2T7P0C7T2 308 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 HKR1P10072 659 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 SLC2A1P11166 492 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 PRKXP51817 358 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 ACTC1P68032 377 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 ACTA1P68133 377 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 ZNF773Q6PK81 442 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 RBMS3Q6XE24 437 aaKnown RBP9.41□□□□□ -0.9
CLCF1-202ENST00000533438 SHFQ7M4L6 423 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 ERI1Q8IV48 349 aaKnown RBP9.41□□□□□ -0.9
CLCF1-202ENST00000533438 STX19Q8N4C7 294 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 ACBD7Q8N6N7 88 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 OR2T27Q8NH04 317 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 SGCDQ92629 289 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 DUX5Q96PT3 197 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 CDCA4Q9BXL8 241 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 MS4A7Q9GZW8 240 aaPredicted RBP9.41□□□□□ -0.9
CLCF1-202ENST00000533438 FN3KRPQ9HA64 309 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 INPP5EQ9NRR6 644 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 CENPMQ9NSP4 180 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 ERVK-18Q9QC07 812 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 RNF7Q9UBF6 113 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 CTSZQ9UBR2 303 aa9.41□□□□□ -0.9
CLCF1-202ENST00000533438 CLN8Q9UBY8 286 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms