RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 OR51H1Q8NH63 302 aa10.97□□□□□ -0.65
BDNF-218ENST00000533246 NANOS1Q8WY41 292 aaKnown RBP10.97□□□□□ -0.65
BDNF-218ENST00000533246 ISOC2Q96AB3 205 aa10.97□□□□□ -0.65
BDNF-218ENST00000533246 FAM234AQ9H0X4 552 aa10.97□□□□□ -0.65
BDNF-218ENST00000533246 HIPK2Q9H2X6 1198 aa10.97□□□□□ -0.65
BDNF-218ENST00000533246 FN3KRPQ9HA64 309 aa10.97□□□□□ -0.65
BDNF-218ENST00000533246 OR5V1Q9UGF6 321 aa10.97□□□□□ -0.65
BDNF-218ENST00000533246 PUS1Q9Y606 427 aaKnown RBP eCLIP10.97□□□□□ -0.65
BDNF-218ENST00000533246 VSTM5A8MXK1 200 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 GRPP07492 148 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 GABRA2P47869 451 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 ZNF136P52737 540 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 ZNF85Q03923 595 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 C4orf17Q53FE4 359 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 BRICD5Q6PL45 260 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 DEGS2Q6QHC5 323 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 SLC43A2Q8N370 569 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 FAM24BQ8N5W8 94 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 UBALD1Q8TB05 177 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 S1PR5Q9H228 398 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 A0A0U1RQK1 487 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 OR5H14A6NHG9 310 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 PLA2G10O15496 165 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 IDH3GP51553 393 aaPredicted RBP10.96□□□□□ -0.65
BDNF-218ENST00000533246 FOXK1P85037 733 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 GUCA2BQ16661 112 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 Q7L0L9 218 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 VSTM2LQ96N03 204 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 CES1P1Q9UKY3 287 aa10.96□□□□□ -0.65
BDNF-218ENST00000533246 TNFSF11O14788 317 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 LANCL1O43813 399 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 CHRM2P08172 466 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 ZNF728P0DKX0 622 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 CD46P15529 392 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 TBXA2RP21731 343 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 EGR3Q06889 387 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 FOXO1Q12778 655 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 ZNF79Q15937 498 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 ST3GAL2Q16842 350 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 C1orf185Q5T7R7 199 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 ZNF385CQ66K41 422 aaPredicted RBP10.96□□□□□ -0.66
BDNF-218ENST00000533246 FAM213BQ8TBF2 198 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 ST8SIA1Q92185 356 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 FAM122AQ96E09 287 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 C4orf45Q96LM5 186 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 SPIN2AQ99865 258 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 SPIN2BQ9BPZ2 258 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 TIMM8BQ9Y5J9 83 aaPredicted RBP10.96□□□□□ -0.66
BDNF-218ENST00000533246 KCNMB2Q9Y691 235 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 R4GMQ9 66 aa10.96□□□□□ -0.66
BDNF-218ENST00000533246 PARP14Q460N5 1801 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 A0A0D9SG52 128 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 PLSCR5A0PG75 271 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 OR4E1P0C645 316 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 CNR1P21554 472 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 PWWP2BQ6NUJ5 590 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 C20orf196Q8IYI0 205 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 ZPLD1Q8TCW7 415 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 SLC25A43Q8WUT9 341 aaPredicted RBP10.95□□□□□ -0.66
BDNF-218ENST00000533246 TSPAN32Q96QS1 320 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 MARVELD1Q9BSK0 173 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 SLC25A32Q9H2D1 315 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 ZCCHC4Q9H5U6 513 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 DOCK7Q96N67 2140 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.95□□□□□ -0.66
BDNF-218ENST00000533246 MPC2O95563 127 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 CT45A8P0DMV1 189 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 CT45A9P0DMV2 189 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 NFYBP25208 207 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 IRF3Q14653 427 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 HLXQ14774 488 aaPredicted RBP10.95□□□□□ -0.66
BDNF-218ENST00000533246 CT45A2Q5DJT8 189 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 WIPI1Q5MNZ9 446 aaPredicted RBP10.95□□□□□ -0.66
BDNF-218ENST00000533246 AADACL3Q5VUY0 350 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 SPNS3Q6ZMD2 512 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 TMEM91Q6ZNR0 172 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 OR51A4Q8NGJ6 313 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 OR51F2Q8NH61 342 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 MISP3Q96FF7 219 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 PBDC1Q9BVG4 233 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 SLCO5A1Q9H2Y9 848 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 UCK1Q9HA47 277 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 TRAV1-2A0A0B4J238 106 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 RAB27BO00194 218 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 CD80P33681 288 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 FUT5Q11128 374 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 NAXDQ8IW45 347 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 RFLNBQ8N5W9 214 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 OIT3Q8WWZ8 545 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 DLL4Q9NR61 685 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 V9GYH0 126 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 CACNA1BQ00975 2339 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 SHANK1Q9Y566 2161 aa10.95□□□□□ -0.66
BDNF-218ENST00000533246 ZNF831Q5JPB2 1677 aa10.94□□□□□ -0.66
BDNF-218ENST00000533246 hCG_1809904A0A1W2PP81 198 aa10.94□□□□□ -0.66
BDNF-218ENST00000533246 A0A1W2PR64 198 aa10.94□□□□□ -0.66
BDNF-218ENST00000533246 A0A1W2PRV1 198 aa10.94□□□□□ -0.66
BDNF-218ENST00000533246 TMEM218A2RU14 115 aa10.94□□□□□ -0.66
BDNF-218ENST00000533246 C4orf47A7E2U8 309 aa10.94□□□□□ -0.66
BDNF-218ENST00000533246 SLC17A2O00624 439 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms