RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 IGLV1-36A0A0B4J1U3 117 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 TRBV4-1A0A0J9YWV2 114 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 IRGMA1A4Y4 181 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 EFCAB10A6NFE3 127 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 CCDC160A6NGH7 325 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 F5H5K5 113 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 LGALS8O00214 317 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 RGS10O43665 173 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 CA6P23280 308 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 POLR2IP36954 125 aaKnown RBP14.3□□□□□ -0.12
PKP3-208ENST00000531857 TMBIM6P55061 237 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 ARF6P62330 175 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 SLC35A2P78381 396 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 PTGES3Q15185 160 aaKnown RBP14.3□□□□□ -0.12
PKP3-208ENST00000531857 OR8G1Q15617 311 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 SLC25A30Q5SVS4 291 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 SLX4IPQ5VYV7 408 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 SLC18B1Q6NT16 456 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 RPL13AP3Q6NVV1 102 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 PGBD2Q6P3X8 592 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 Q6ZSV7 163 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 LDLRAD3Q86YD5 345 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 SPARTQ8N0X7 666 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 OR6V1Q8N148 313 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 PNLDC1Q8NA58 520 aaKnown RBP14.3□□□□□ -0.12
PKP3-208ENST00000531857 BPIFB6Q8NFQ5 453 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 OR8J1Q8NGP2 316 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 FAM110DQ8TAY7 271 aaPredicted RBP14.3□□□□□ -0.12
PKP3-208ENST00000531857 NIPSNAP1Q9BPW8 284 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 SRA1Q9HD15 236 aaKnown RBP14.3□□□□□ -0.12
PKP3-208ENST00000531857 B9D1Q9UPM9 204 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 CEPT1Q9Y6K0 416 aa14.3□□□□□ -0.12
PKP3-208ENST00000531857 PPP1R3DO95685 299 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 TXNDC12O95881 172 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 LCATP04180 440 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 ANOS1P23352 680 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 GSTT1P30711 240 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 OMPP47874 163 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 TSPAN31Q12999 210 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 OR8B8Q15620 311 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 FOXB2Q5VYV0 432 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 DPY19L2P2Q6ZN68 376 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 RASSF6Q6ZTQ3 369 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 PGAP1Q75T13 922 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 ENTHD1Q8IYW4 607 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 PIP4P2Q8N4L2 257 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 ZSCAN4Q8NAM6 433 aaPredicted RBP14.29□□□□□ -0.12
PKP3-208ENST00000531857 SCCPDHQ8NBX0 429 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 SLC26A10Q8NG04 563 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 OR9Q2Q8NGE9 314 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 FAM81AQ8TBF8 368 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 SPRYD4Q8WW59 207 aaPredicted RBP14.29□□□□□ -0.12
PKP3-208ENST00000531857 FN3KRPQ9HA64 309 aa14.29□□□□□ -0.12
PKP3-208ENST00000531857 PNRC2Q9NPJ4 139 aaKnown RBP14.29□□□□□ -0.12
PKP3-208ENST00000531857 PLXNB1O43157 2135 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 PTBP3O95758 552 aaKnown RBP14.28□□□□□ -0.12
PKP3-208ENST00000531857 GYPAP02724 150 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 PIPP12273 146 aaPredicted RBP14.28□□□□□ -0.12
PKP3-208ENST00000531857 DCKP27707 260 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 CRABP1P29762 137 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 POU4F2Q12837 409 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 MALLQ13021 153 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 KCNJ8Q15842 424 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 ZNF826PQ6ZT77 177 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 BTN2A1Q7KYR7 527 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 ERI1Q8IV48 349 aaKnown RBP14.28□□□□□ -0.12
PKP3-208ENST00000531857 FGFRL1Q8N441 504 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 RAB2BQ8WUD1 216 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 RORBQ92753 470 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 ATF6BQ99941 703 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 SLC25A19Q9HC21 320 aa14.28□□□□□ -0.12
PKP3-208ENST00000531857 C5orf63A6NC05 138 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 OOEPA6NGQ2 149 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 CD300LBA8K4G0 201 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 DVL1O14640 695 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 GSSP48637 474 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 SEC23BQ15437 767 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 C12orf73Q69YU5 71 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 DNM1P34Q6PK57 102 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 MRPL21Q7Z2W9 205 aaKnown RBP14.27□□□□□ -0.13
PKP3-208ENST00000531857 FAM90A1Q86YD7 464 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 OR13F1Q8NGS4 319 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 ERMAPQ96PL5 475 aaPredicted RBP14.27□□□□□ -0.13
PKP3-208ENST00000531857 NMNAT3Q96T66 252 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 ADAT1Q9BUB4 502 aaKnown RBP14.27□□□□□ -0.13
PKP3-208ENST00000531857 YIPF3Q9GZM5 350 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 C1orf123Q9NWV4 160 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 PSORS1C1Q9UIG5 152 aa14.27□□□□□ -0.13
PKP3-208ENST00000531857 IGHV3OR15-7A0A075B7D8 119 aa14.26□□□□□ -0.13
PKP3-208ENST00000531857 TRAV38-1A0A0B4J264 116 aa14.26□□□□□ -0.13
PKP3-208ENST00000531857 UNC119BA6NIH7 251 aa14.26□□□□□ -0.13
PKP3-208ENST00000531857 PTGES3LE9PB15 166 aa14.26□□□□□ -0.13
PKP3-208ENST00000531857 H3BN98 237 aa14.26□□□□□ -0.13
PKP3-208ENST00000531857 HMGN1P05114 100 aa14.26□□□□□ -0.13
PKP3-208ENST00000531857 GABRB1P18505 474 aa14.26□□□□□ -0.13
PKP3-208ENST00000531857 ZNF92Q03936 586 aa14.26□□□□□ -0.13
PKP3-208ENST00000531857 ECH1Q13011 328 aa14.26□□□□□ -0.13
PKP3-208ENST00000531857 SNAI3Q3KNW1 292 aa14.26□□□□□ -0.13
PKP3-208ENST00000531857 RNLSQ5VYX0 342 aa14.26□□□□□ -0.13
PKP3-208ENST00000531857 LAIR2Q6ISS4 152 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms