RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 MPC1Q9Y5U8 109 aa18.42■□□□□ 0.54
TRAPPC4-210ENST00000531290 MGAM2Q2M2H8 2515 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 NDUFB3O43676 98 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 SELENOFO60613 162 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 MELTFP08582 738 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 CDONQ4KMG0 1287 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 WDR38Q5JTN6 314 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 CPOQ8IVL8 374 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 HS3ST5Q8IZT8 346 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 SCCPDHQ8NBX0 429 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 OR4F5Q8NH21 305 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 OR5K1Q8NHB7 308 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 SSMEM1Q8WWF3 244 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 C12orf43Q96C57 262 aaKnown RBP18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 CHIAQ9BZP6 476 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 BEX1Q9HBH7 125 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 ABCB9Q9NP78 766 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 MMP24Q9Y5R2 645 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 KPTNQ9Y664 436 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 POMT1Q9Y6A1 747 aa18.41■□□□□ 0.54
TRAPPC4-210ENST00000531290 ZNF850A8MQ14 1090 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 G3V2T6 193 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 GPR37O15354 613 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 PRODHO43272 600 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 FCN3O75636 299 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 RPS7P62081 194 aaKnown RBP18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 PRDX4Q13162 271 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 ATP6AP1Q15904 470 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 KCTD8Q6ZWB6 473 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 UTP4Q969X6 686 aaKnown RBP18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 ITPKCQ96DU7 683 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 HIST1H2AAQ96QV6 131 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 TLNRD1Q9H1K6 362 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 NIPAL2Q9H841 368 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 PAPOLBQ9NRJ5 636 aaKnown RBP18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 ONECUT1Q9UBC0 465 aa18.4■□□□□ 0.54
TRAPPC4-210ENST00000531290 TMEM210A6NLX4 147 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 CST4P01036 141 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 KNG1P01042 644 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 RAG2P55895 527 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 GMFBP60983 142 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 CDK5Q00535 292 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 IKZF1Q13422 519 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 LRRC10Q5BKY1 277 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 SLC35D3Q5M8T2 416 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 ASRGL1Q7L266 308 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 ZDHHC13Q8IUH4 622 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 C10orf67Q8IYJ2 551 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 CMTM4Q8IZR5 234 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 OR5P3Q8WZ94 311 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 PIGCQ92535 297 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 SEH1LQ96EE3 360 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 RNF170Q96K19 258 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 HAO2Q9NYQ3 351 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 DNAJB11Q9UBS4 358 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 ZNF391Q9UJN7 358 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 LAMP5Q9UJQ1 280 aa18.39■□□□□ 0.53
TRAPPC4-210ENST00000531290 A0A1B0GVI7 797 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 A0A1B0GW55 424 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 DUX4L2P0CJ85 424 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 DUX4L3P0CJ86 424 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 DUX4L4P0CJ87 422 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 DUX4L5P0CJ88 424 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 DUX4L6P0CJ89 424 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 DUX4L7P0CJ90 424 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 ELF3P78545 371 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 DUX4L9Q6RFH8 374 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 C17orf107Q6ZR85 190 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 KRT77Q7Z794 578 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 PDZD9Q8IXQ8 264 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 FGFRL1Q8N441 504 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 KIR3DL3Q8N743 410 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 FAM216BQ8N7L0 139 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 LY6G5BQ8NDX9 201 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 OR5T2Q8NGG2 359 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 OR10Z1Q8NGY1 313 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 RPL3LQ92901 407 aaKnown RBP18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 DUS3LQ96G46 650 aaKnown RBP18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 DMRTB1Q96MA1 342 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 PKP2Q99959 881 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 DUX4Q9UBX2 424 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 FAM96BQ9Y3D0 163 aa18.38■□□□□ 0.53
TRAPPC4-210ENST00000531290 WIPF1O43516 503 aa18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 ACKR3P25106 362 aa18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 TGM4P49221 684 aa18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 PSMA6P60900 246 aaKnown RBP18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 ATPAF1Q5TC12 328 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 TREML4Q6UXN2 200 aa18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 VMO1Q7Z5L0 202 aa18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 ZDHHC23Q8IYP9 409 aa18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 FAM81AQ8TBF8 368 aa18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 PRRG3Q9BZD7 231 aa18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 SNTG1Q9NSN8 517 aa18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 C1RLQ9NZP8 487 aa18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 ENOPH1Q9UHY7 261 aa18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 KLHDC2Q9Y2U9 406 aa18.37■□□□□ 0.53
TRAPPC4-210ENST00000531290 A0A0U1RQK1 487 aa18.36■□□□□ 0.53
TRAPPC4-210ENST00000531290 NKX6-3A6NJ46 265 aa18.36■□□□□ 0.53
TRAPPC4-210ENST00000531290 NDUFA7O95182 113 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms