RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ZNF454Q8N9F8 522 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 TBC1D15Q8TC07 691 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 WFDC12Q8WWY7 111 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 DMRTB1Q96MA1 342 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 RTL8AQ9BWD3 113 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 C1orf21Q9H246 121 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 TAS2R1Q9NYW7 299 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 PDP1Q9P0J1 537 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-205ENST00000531042 CMYA5Q8N3K9 4069 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 A0A0U1RQK1 487 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 A0A1B0GVI7 797 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 ZNF850A8MQ14 1090 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 GPR37O15354 613 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 PRODHO43272 600 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 ACKR3P25106 362 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 TGM4P49221 684 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 RPL15P61313 204 aaKnown RBP13□□□□□ -0.33
CPSF1-205ENST00000531042 CDK5Q00535 292 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 SRSF4Q08170 494 aaKnown RBP13□□□□□ -0.33
CPSF1-205ENST00000531042 PRDX4Q13162 271 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 ATPAF1Q5TC12 328 aaPredicted RBP13□□□□□ -0.33
CPSF1-205ENST00000531042 OLFML2AQ68BL7 652 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 STUMQ69YW2 141 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 LDLRAD3Q86YD5 345 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 PDZD9Q8IXQ8 264 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 SCCPDHQ8NBX0 429 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 OR5T2Q8NGG2 359 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 OR10Z1Q8NGY1 313 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 CANT1Q8WVQ1 401 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 OR5P3Q8WZ94 311 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 DYRK2Q92630 601 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 LYZL4Q96KX0 146 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 ABCB9Q9NP78 766 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 HAO2Q9NYQ3 351 aa13□□□□□ -0.33
CPSF1-205ENST00000531042 CLPSL1A2RUU4 121 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 TMEM210A6NLX4 147 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 AQP12BA6NM10 295 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 GNGT2O14610 69 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 NDUFB3O43676 98 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 FAM107AO95990 144 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 CST4P01036 141 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 IGHV4-59P01825 116 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 HMGN1P05114 100 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 OSMP13725 252 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 IER3P46695 156 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 IKZF1Q13422 519 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 FAM76BQ5HYJ3 339 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 C17orf107Q6ZR85 190 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 CPOQ8IVL8 374 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 AQP12AQ8IXF9 295 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 CCDC197Q8NCU1 140 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 OR8B12Q8NGG6 310 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 PIGCQ92535 297 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 RPL3LQ92901 407 aaKnown RBP12.99□□□□□ -0.33
CPSF1-205ENST00000531042 PKP2Q99959 881 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 DCTN5Q9BTE1 182 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 THTPAQ9BU02 230 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 FGF23Q9GZV9 251 aaPredicted RBP12.99□□□□□ -0.33
CPSF1-205ENST00000531042 DNTTIP1Q9H147 329 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 WDR13Q9H1Z4 485 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 ONECUT1Q9UBC0 465 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 ZNF391Q9UJN7 358 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 KLHDC2Q9Y2U9 406 aa12.99□□□□□ -0.33
CPSF1-205ENST00000531042 VWFP04275 2813 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 PSMA6P60900 246 aaKnown RBP12.98□□□□□ -0.33
CPSF1-205ENST00000531042 GMFBP60983 142 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 LRRC10Q5BKY1 277 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 SLC35D3Q5M8T2 416 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 METAP1DQ6UB28 335 aaPredicted RBP12.98□□□□□ -0.33
CPSF1-205ENST00000531042 CMTM4Q8IZR5 234 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 HS3ST5Q8IZT8 346 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 BBS1Q8NFJ9 593 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 HPSE2Q8WWQ2 592 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 RNF170Q96K19 258 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 RAB3IPQ96QF0 476 aaPredicted RBP12.98□□□□□ -0.33
CPSF1-205ENST00000531042 NIPAL2Q9H841 368 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 ZNF556Q9HAH1 456 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 SNTG1Q9NSN8 517 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 DNAJB11Q9UBS4 358 aa12.98□□□□□ -0.33
CPSF1-205ENST00000531042 AKR7A2O43488 359 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 GPR137BO60478 399 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 SELLP14151 372 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 HOXB6P17509 224 aaKnown RBP12.97□□□□□ -0.33
CPSF1-205ENST00000531042 ALOX5APP20292 161 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 PRKACGP22612 351 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 SLC2A5P22732 501 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 DCTDP32321 178 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 HCCSP53701 268 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 ZNF788Q6ZQV5 615 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 KCTD8Q6ZWB6 473 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 ZDHHC23Q8IYP9 409 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 Q8N7P7 452 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 ANGPTL6Q8NI99 470 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 C8orf46Q8TAG6 207 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 NPRL2Q8WTW4 380 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 GAFA1Q96PS6 74 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 CITED1Q99966 193 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 DPAGT1Q9H3H5 408 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 SIRT7Q9NRC8 400 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms