RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 THOC3Q96J01 351 aaKnown RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 GPR137Q96N19 417 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 ZNF385AQ96PM9 386 aaKnown RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 RSRP1Q9BUV0 290 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 RBM24Q9BX46 236 aaKnown RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 TMEM59Q9BXS4 323 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 BEX2Q9BXY8 128 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OR10A4Q9H209 315 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OPA3Q9H6K4 179 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 EXO5Q9H790 373 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 ZNF703Q9H7S9 590 aaPredicted RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 IFT46Q9NQC8 304 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 GPR84Q9NQS5 396 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 TMEM38BQ9NVV0 291 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 NKIRAS2Q9NYR9 191 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 PLEK2Q9NYT0 353 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 LRFN1Q9P244 771 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 MGAT4CQ9UBM8 478 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 CGGBP1Q9UFW8 167 aaPredicted RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 MCTS1Q9ULC4 181 aaKnown RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 HSPB11Q9Y547 144 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 TIMM10BQ9Y5J6 103 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 ZDBF2Q9HCK1 2354 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 CEACAM18A8MTB9 384 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 HMSDA8MTL9 139 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 KLRC4-KLRK1H3BQV0 150 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 AGRPO00253 132 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 AKR7A2O43488 359 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 SYNGR3O43761 229 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 CXCL13O43927 109 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 CDC14BO60729 498 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 TRAPPC6AO75865 159 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 NEURL1O76050 574 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 WDPCPO95876 746 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 CD3DP04234 171 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 IFNA6P05013 189 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 SERPINA5P05154 406 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 HCKP08631 526 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 HIST1H1DP16402 221 aaKnown RBP4.86□□□□□ -1.63
PCF11-205ENST00000530906 HLA-GP17693 338 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 CPT2P23786 658 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 AGTR1P30556 359 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 CDAP32320 146 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 PMELP40967 661 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 PTGFRP43088 359 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 RAD52P43351 418 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 SLC6A9P48067 706 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 SELENOPP49908 381 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 TAS2R46P59540 309 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 GNG2P59768 71 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 RPS18P62269 152 aaKnown RBP4.86□□□□□ -1.63
PCF11-205ENST00000530906 RPS27AP62979 156 aaKnown RBP4.86□□□□□ -1.63
PCF11-205ENST00000530906 SRSF4Q08170 494 aaKnown RBP4.86□□□□□ -1.63
PCF11-205ENST00000530906 UNC119Q13432 240 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 SURF2Q15527 256 aaPredicted RBP4.86□□□□□ -1.63
PCF11-205ENST00000530906 LPAL2Q16609 132 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 CDNFQ49AH0 187 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 TMEM255AQ5JRV8 349 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 STPG1Q5TH74 334 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 LAMTOR1Q6IAA8 161 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 LIN54Q6MZP7 749 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 GLIPR1L1Q6UWM5 242 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 CHMP1BQ7LBR1 199 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 YRDCQ86U90 279 aaKnown RBP4.86□□□□□ -1.63
PCF11-205ENST00000530906 TMEM17Q86X19 198 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 LSRQ86X29 649 aaPredicted RBP4.86□□□□□ -1.63
PCF11-205ENST00000530906 ANGPTL5Q86XS5 388 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 ZNF101Q8IZC7 436 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 PAQR4Q8N4S7 273 aaPredicted RBP4.86□□□□□ -1.63
PCF11-205ENST00000530906 UXS1Q8NBZ7 420 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 SEMA6DQ8NFY4 1073 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 OR51S1Q8NGJ8 323 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 OR1F12Q8NHA8 337 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 TNFAIP8L1Q8WVP5 186 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 HAS2Q92819 552 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 GCDHQ92947 438 aaPredicted RBP4.86□□□□□ -1.63
PCF11-205ENST00000530906 RAB3CQ96E17 227 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 FAM71F1Q96KD3 344 aaPredicted RBP4.86□□□□□ -1.63
PCF11-205ENST00000530906 C1orf147Q96MC9 270 aaPredicted RBP4.86□□□□□ -1.63
PCF11-205ENST00000530906 GPER1Q99527 375 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 S100A13Q99584 98 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 FOXB1Q99853 325 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 TM2D1Q9BX74 207 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 SRXN1Q9BYN0 137 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 KRTAP17-1Q9BYP8 105 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 PRDM14Q9GZV8 571 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 ACKR4Q9NPB9 350 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 B3GNT2Q9NY97 397 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 IL36GQ9NZH8 169 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 ZNF69Q9UC07 566 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 MGAT4AQ9UM21 535 aa4.86□□□□□ -1.63
PCF11-205ENST00000530906 PHF3Q92576 2039 aaKnown RBP4.85□□□□□ -1.63
PCF11-205ENST00000530906 SDK2Q58EX2 2172 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 SPTBN5Q9NRC6 3674 aaKnown RBP4.85□□□□□ -1.63
PCF11-205ENST00000530906 A0A0B4J2A0 478 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 TMEM235A6NFC5 223 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 ZNF587BE7ETH6 402 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 F5H5P2 479 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 PYCARD-AS1I3L0S3 204 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 M0R233 179 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms