RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 C1orf174Q8IYL3 243 aa18.29■□□□□ 0.52
VPS28-212ENST00000530836 PNLDC1Q8NA58 520 aaKnown RBP18.29■□□□□ 0.52
VPS28-212ENST00000530836 CSNK2A3Q8NEV1 391 aa18.29■□□□□ 0.52
VPS28-212ENST00000530836 OR4M1Q8NGD0 313 aa18.29■□□□□ 0.52
VPS28-212ENST00000530836 OR51D1Q8NGF3 324 aa18.29■□□□□ 0.52
VPS28-212ENST00000530836 CGGBP1Q9UFW8 167 aaPredicted RBP18.29■□□□□ 0.52
VPS28-212ENST00000530836 STARD10Q9Y365 291 aa18.29■□□□□ 0.52
VPS28-212ENST00000530836 KLF2Q9Y5W3 355 aaPredicted RBP18.29■□□□□ 0.52
VPS28-212ENST00000530836 USP9YO00507 2555 aaPredicted RBP18.28■□□□□ 0.52
VPS28-212ENST00000530836 IGLV1-44P01699 117 aa18.28■□□□□ 0.52
VPS28-212ENST00000530836 WNT5AP41221 380 aa18.28■□□□□ 0.52
VPS28-212ENST00000530836 TNK1Q13470 666 aa18.28■□□□□ 0.52
VPS28-212ENST00000530836 P2RY14Q15391 338 aa18.28■□□□□ 0.52
VPS28-212ENST00000530836 CMTM4Q8IZR5 234 aa18.28■□□□□ 0.52
VPS28-212ENST00000530836 SYNPRQ8TBG9 265 aa18.28■□□□□ 0.52
VPS28-212ENST00000530836 HAVCR1Q96D42 359 aa18.28■□□□□ 0.52
VPS28-212ENST00000530836 SDHCQ99643 169 aaPredicted RBP18.28■□□□□ 0.52
VPS28-212ENST00000530836 CNTD2Q9H8S5 307 aa18.28■□□□□ 0.52
VPS28-212ENST00000530836 ABCB10Q9NRK6 738 aa18.28■□□□□ 0.52
VPS28-212ENST00000530836 RHBDL2Q9NX52 303 aa18.28■□□□□ 0.52
VPS28-212ENST00000530836 KCNN3Q9UGI6 736 aa18.28■□□□□ 0.52
VPS28-212ENST00000530836 SLC25A15Q9Y619 301 aa18.28■□□□□ 0.52
VPS28-212ENST00000530836 IGKV1-9A0A0C4DH69 117 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 A0A1W2PR80 420 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 EEF1E1-BLOC1S5C9J1V9 151 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 EEF1E1O43324 174 aaKnown RBP18.27■□□□□ 0.52
VPS28-212ENST00000530836 CLDN1O95832 211 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 BPNT1O95861 308 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 UBBP0CG47 229 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 TFF3Q07654 80 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 UBE2V2Q15819 145 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 RGS21Q2M5E4 152 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 FBXL19-AS1Q494R0 122 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 OR8H2Q8N162 312 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 PIGTQ969N2 578 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 MUCL1Q96DR8 90 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 SLC25A38Q96DW6 304 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 OR10A4Q9H209 315 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 GHRLQ9UBU3 117 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 RTTNQ86VV8 2226 aa18.27■□□□□ 0.52
VPS28-212ENST00000530836 GMDSO60547 372 aa18.27■□□□□ 0.51
VPS28-212ENST00000530836 NRASP01111 189 aa18.27■□□□□ 0.51
VPS28-212ENST00000530836 NGFP01138 241 aa18.27■□□□□ 0.51
VPS28-212ENST00000530836 RAB6AP20340 208 aa18.27■□□□□ 0.51
VPS28-212ENST00000530836 AZGP1P25311 298 aaKnown RBP18.27■□□□□ 0.51
VPS28-212ENST00000530836 ASCL1P50553 236 aa18.27■□□□□ 0.51
VPS28-212ENST00000530836 LYSMD2Q8IV50 215 aa18.27■□□□□ 0.51
VPS28-212ENST00000530836 ZNF101Q8IZC7 436 aa18.27■□□□□ 0.51
VPS28-212ENST00000530836 PAQR4Q8N4S7 273 aaPredicted RBP18.27■□□□□ 0.51
VPS28-212ENST00000530836 FBLN5Q9UBX5 448 aa18.27■□□□□ 0.51
VPS28-212ENST00000530836 RHBDD3Q9Y3P4 386 aa18.27■□□□□ 0.51
VPS28-212ENST00000530836 GGT3PA6NGU5 568 aa18.26■□□□□ 0.51
VPS28-212ENST00000530836 DEFA1P59665 94 aa18.26■□□□□ 0.51
VPS28-212ENST00000530836 DEFA3P59666 94 aa18.26■□□□□ 0.51
VPS28-212ENST00000530836 KISS1Q15726 138 aa18.26■□□□□ 0.51
VPS28-212ENST00000530836 FAM189A2Q15884 450 aa18.26■□□□□ 0.51
VPS28-212ENST00000530836 Q8N402 240 aa18.26■□□□□ 0.51
VPS28-212ENST00000530836 OR4D6Q8NGJ1 314 aa18.26■□□□□ 0.51
VPS28-212ENST00000530836 PHF21AQ96BD5 680 aa18.26■□□□□ 0.51
VPS28-212ENST00000530836 S100PBPQ96BU1 408 aa18.26■□□□□ 0.51
VPS28-212ENST00000530836 GPER1Q99527 375 aa18.26■□□□□ 0.51
VPS28-212ENST00000530836 PTTG3PQ9NZH4 202 aa18.26■□□□□ 0.51
VPS28-212ENST00000530836 SLC7A11Q9UPY5 501 aa18.26■□□□□ 0.51
VPS28-212ENST00000530836 SPTAN1Q13813 2472 aaKnown RBP18.26■□□□□ 0.51
VPS28-212ENST00000530836 A1L4Q6 167 aa18.25■□□□□ 0.51
VPS28-212ENST00000530836 CST4P01036 141 aa18.25■□□□□ 0.51
VPS28-212ENST00000530836 CELA3BP08861 270 aa18.25■□□□□ 0.51
VPS28-212ENST00000530836 MNDAP41218 407 aa18.25■□□□□ 0.51
VPS28-212ENST00000530836 RAD52P43351 418 aa18.25■□□□□ 0.51
VPS28-212ENST00000530836 IFITM3Q01628 133 aa18.25■□□□□ 0.51
VPS28-212ENST00000530836 STEAP3Q658P3 488 aa18.25■□□□□ 0.51
VPS28-212ENST00000530836 FBXW12Q6X9E4 464 aa18.25■□□□□ 0.51
VPS28-212ENST00000530836 LHFPL2Q6ZUX7 228 aa18.25■□□□□ 0.51
VPS28-212ENST00000530836 ANGPTL5Q86XS5 388 aa18.25■□□□□ 0.51
VPS28-212ENST00000530836 DIABLOQ9NR28 239 aa18.25■□□□□ 0.51
VPS28-212ENST00000530836 A0A0A6YYH2 397 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 A0A0G2JMP0 313 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 A0A0X1KG70 313 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 TMEM272A0A1B0GTI8 110 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 A6NJ64 397 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 LDLRAD4O15165 306 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 CTDSPLO15194 276 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 SMPD2O60906 423 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 IL7P13232 177 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 ALDH3B1P43353 468 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 FUT6P51993 359 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 UCP2P55851 309 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 SCN1BQ07699 218 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 AWAT2Q6E213 333 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 RFPL4BQ6ZWI9 263 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 OR2W3Q7Z3T1 314 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 MINDY2Q8NBR6 621 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 OR4M2Q8NGB6 313 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 SETD6Q8TBK2 473 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 UBASH3BQ8TF42 649 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 LRRC46Q96FV0 321 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 RAB22AQ9UL26 194 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 MRPS28Q9Y2Q9 187 aaKnown RBP18.24■□□□□ 0.51
VPS28-212ENST00000530836 ADGRG4Q8IZF6 3080 aa18.24■□□□□ 0.51
VPS28-212ENST00000530836 SCGNO76038 276 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms