RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 ACAA1P09110 424 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-219ENST00000530495 HSD17B1P14061 328 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 SPI1P17947 270 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 HSD11B1P28845 292 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 PRDX6P30041 224 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 CAV3P56539 151 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 CRMP1Q14194 572 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 EIF2B1Q14232 305 aaKnown RBP12.18□□□□□ -0.46
CAPN1-219ENST00000530495 SNCBQ16143 134 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 DGUOKQ16854 277 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 HIST2H2BDQ6DRA6 164 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 ZNF770Q6IQ21 691 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-219ENST00000530495 RASSF6Q6ZTQ3 369 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 FAM57BQ71RH2 274 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 FTMTQ8N4E7 242 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 ANGPTL6Q8NI99 470 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 RNF133Q8WVZ7 376 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 GAFA1Q96PS6 74 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 SSX3Q99909 188 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 MICU1Q9BPX6 476 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 BTBD10Q9BSF8 475 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 ABHD6Q9BV23 337 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 RTL8AQ9BWD3 113 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 PAPOLGQ9BWT3 736 aaKnown RBP12.18□□□□□ -0.46
CAPN1-219ENST00000530495 MYLK2Q9H1R3 596 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 MEGF9Q9H1U4 602 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 RGCCQ9H4X1 137 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 ZNF391Q9UJN7 358 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 SIGLEC9Q9Y336 463 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 MAB21L2Q9Y586 359 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 MPC1Q9Y5U8 109 aa12.18□□□□□ -0.46
CAPN1-219ENST00000530495 NKX6-3A6NJ46 265 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 TMEM210A6NLX4 147 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 ANXA2P2A6NMY6 339 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 CLUP10909 449 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 MSX2P35548 267 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-219ENST00000530495 ZNF121P58317 390 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-219ENST00000530495 MXRA7P84157 204 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 BLMHQ13867 455 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 LINC01590Q5TEZ4 76 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 HCP5Q6MZN7 132 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 CRIP3Q6Q6R5 217 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 Q6ZPA2 131 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 REC114Q7Z4M0 266 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 OR9Q2Q8NGE9 314 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 OR6K6Q8NGW6 343 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 C17orf50Q8WW18 174 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 OR5P3Q8WZ94 311 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 RPL3LQ92901 407 aaKnown RBP12.17□□□□□ -0.46
CAPN1-219ENST00000530495 DUS3LQ96G46 650 aaKnown RBP12.17□□□□□ -0.46
CAPN1-219ENST00000530495 AJUBAQ96IF1 538 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 NSMCE2Q96MF7 247 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 TSSK6Q9BXA6 273 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 OR10A2Q9H208 303 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 TBC1D23Q9NUY8 699 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 FOXJ3Q9UPW0 622 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 BAIAP2Q9UQB8 552 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 SF3B6Q9Y3B4 125 aaKnown RBP12.17□□□□□ -0.46
CAPN1-219ENST00000530495 LYVE1Q9Y5Y7 322 aa12.17□□□□□ -0.46
CAPN1-219ENST00000530495 A0A1W2PQ09 198 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 SIGLEC5O15389 551 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 AKR7A2O43488 359 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 ALX3O95076 343 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 CST4P01036 141 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 TFF1P04155 84 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 GMFBP60983 142 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 PRDX4Q13162 271 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 FAM189A2Q15884 450 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 AANATQ16613 207 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 OR5D13Q8NGL4 314 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 OR4C13Q8NGP0 309 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 OR4Q3Q8NH05 313 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 RANBP3Q9H6Z4 567 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-219ENST00000530495 ABCB9Q9NP78 766 aa12.16□□□□□ -0.46
CAPN1-219ENST00000530495 OR2AT4A6NND4 320 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 ZNF850A8MQ14 1090 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 TNFRSF11BO00300 401 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 ARPC2O15144 300 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 NDUFB7P17568 137 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 POU1F1P28069 291 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 DCTDP32321 178 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 OPRL1P41146 370 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 GFOD2Q3B7J2 385 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 SAMD4BQ5PRF9 694 aaKnown RBP12.15□□□□□ -0.46
CAPN1-219ENST00000530495 DTX3Q8N9I9 347 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 OR2T33Q8NG76 320 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 OR51G2Q8NGK0 314 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 OR2T6Q8NHC8 308 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 PPP1R14AQ96A00 147 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 PGAM5Q96HS1 289 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 RNF170Q96K19 258 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 INTS14Q96SY0 518 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 AMELYQ99218 206 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 RAB18Q9NP72 206 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 BRD7Q9NPI1 651 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 DNAJC27Q9NZQ0 273 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 NLKQ9UBE8 527 aa12.15□□□□□ -0.46
CAPN1-219ENST00000530495 H0YAE9 185 aa12.14□□□□□ -0.47
CAPN1-219ENST00000530495 PIN1P1O15428 100 aa12.14□□□□□ -0.47
CAPN1-219ENST00000530495 CCNB2O95067 398 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms