RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 ZIC4Q8N9L1 334 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 OR6M1Q8NGM8 313 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 OR4C13Q8NGP0 309 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 C8orf46Q8TAG6 207 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 MRGPRDQ8TDS7 321 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 ANKRD49Q8WVL7 239 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 CXorf58Q96LI9 332 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 TSPAN32Q96QS1 320 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 RHOXF2Q9BQY4 288 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 LINC00470Q9BZP3 86 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 SHCBP1LQ9BZQ2 653 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 DERL2Q9GZP9 239 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 SIRPDQ9H106 197 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 PPA2Q9H2U2 334 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 NANOGQ9H9S0 305 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 B3GNT2Q9NY97 397 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 TAS2R3Q9NYW6 316 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 ZNRD1Q9P1U0 126 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 SLC7A8Q9UHI5 535 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 TRAPPC4Q9Y296 219 aa5.32□□□□□ -1.56
SVIP-204ENST00000530199 A0A0U1RRA0 63 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 CEACAM18A8MTB9 384 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 K7EPI3 171 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 CCSO14618 274 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 CHEK1O14757 476 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 EIF1BO60739 113 aaKnown RBP5.31□□□□□ -1.56
SVIP-204ENST00000530199 OR6A2O95222 327 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 PTBP3O95758 552 aaKnown RBP5.31□□□□□ -1.56
SVIP-204ENST00000530199 THY1P04216 161 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 THRBP10828 461 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 GLRA1P23415 457 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 CFHR2P36980 270 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 MAGEA6P43360 314 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 COX10Q12887 443 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 QPRTQ15274 297 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 ADAMTSL4-AS1Q5T5F5 129 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 AAED1Q7RTV5 226 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 COMMD6Q7Z4G1 85 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 CALHM3Q86XJ0 350 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 ZNF283Q8N7M2 679 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 OR5W2Q8NH69 310 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 FAM76AQ8TAV0 307 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 SYNPRQ8TBG9 265 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 ST8SIA1Q92185 356 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 LRR1Q96L50 414 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 ALKBH3Q96Q83 286 aaPredicted RBP5.31□□□□□ -1.56
SVIP-204ENST00000530199 COQ7Q99807 217 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 MCRIP2Q9BUT9 160 aaKnown RBP5.31□□□□□ -1.56
SVIP-204ENST00000530199 FUNDC2Q9BWH2 189 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 CLEC7AQ9BXN2 247 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 MTHFD2LQ9H903 347 aaPredicted RBP5.31□□□□□ -1.56
SVIP-204ENST00000530199 ATAD3AQ9NVI7 634 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 TECRQ9NZ01 308 aaKnown RBP5.31□□□□□ -1.56
SVIP-204ENST00000530199 SENP1Q9P0U3 644 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 ACOT9Q9Y305 439 aa5.31□□□□□ -1.56
SVIP-204ENST00000530199 MEIOCA2RUB1 952 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 NPIPB9F8W1W9 429 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 KCNK2O95069 426 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 IGHV1-46P01743 117 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 OPN1SWP03999 348 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 CD55P08174 381 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 FBP1P09467 338 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 MDH2P40926 338 aaKnown RBP5.3□□□□□ -1.56
SVIP-204ENST00000530199 OPRL1P41146 370 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 ZMYND11Q15326 602 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 VPS26BQ4G0F5 336 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 GPAT3Q53EU6 434 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 UNQ9370/PRO34162Q6UXP9 181 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 ADCK1Q86TW2 530 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 CATSPERDQ86XM0 798 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 VSTM4Q8IW00 320 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 ZNF101Q8IZC7 436 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 OR9K2Q8NGE7 335 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 ZNF519Q8TB69 540 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 GPR151Q8TDV0 419 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 C10orf82Q8WW14 230 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 PLEKHA8Q96JA3 519 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 ATOH8Q96SQ7 321 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 EGLN1Q9GZT9 426 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 WDR13Q9H1Z4 485 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 POPDC3Q9HBV1 291 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 TMEM106BQ9NUM4 274 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 DCAF16Q9NXF7 216 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 OPTCQ9UBM4 332 aa5.3□□□□□ -1.56
SVIP-204ENST00000530199 CAB39Q9Y376 341 aaPredicted RBP5.3□□□□□ -1.56
SVIP-204ENST00000530199 KRTAP29-1A8MX34 341 aaPredicted RBP5.29□□□□□ -1.56
SVIP-204ENST00000530199 ZNF879B4DU55 563 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 H3BNH8 94 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 RAD51CO43502 376 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 EIF4E2O60573 245 aaKnown RBP5.29□□□□□ -1.56
SVIP-204ENST00000530199 UPK3AO75631 287 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 WISP3O95389 354 aaPredicted RBP5.29□□□□□ -1.56
SVIP-204ENST00000530199 CLIC3O95833 236 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 IGHV3-13P01766 116 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 OR8G3PP0DMU2 310 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 IVDP26440 423 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 GPR183P32249 361 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 MAGEA3P43357 314 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 GSG1Q2KHT4 349 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 ATP6AP1LQ52LC2 224 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms