RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 FABP7O15540 132 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 CEACAM4O75871 244 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 NRASP01111 189 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 AMY2AP04746 511 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 RLN1P04808 185 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 MPGP29372 298 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 RAD52P43351 418 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 ATP1B3P54709 279 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 IFITM2Q01629 132 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 OR8B8Q15620 311 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 FAAP20Q6NZ36 180 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 SEZ6L2Q6UXD5 910 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 ASCL4Q6XD76 172 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 VASH2Q86V25 355 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 CCDC36Q8IYA8 594 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 BPIFB2Q8N4F0 458 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 ZDHHC22Q8N966 263 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 ASCC1Q8N9N2 400 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 FDCSPQ8NFU4 85 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 OR51T1Q8NGJ9 327 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 GRPEL2Q8TAA5 225 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 MRPS24Q96EL2 167 aaKnown RBP12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 GMPPAQ96IJ6 420 aaPredicted RBP12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 FAM210AQ96ND0 272 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 SPACA5Q96QH8 159 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 OCSTAMPQ9BR26 566 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 KCNN3Q9UGI6 736 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 KLK13Q9UKR3 277 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 MEIS3P1A6NDR6 274 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 AKR7A2O43488 359 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 ZNF735P0CB33 412 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 RBP2P50120 134 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 MTCP1P56278 107 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 FAM3AP98173 230 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 MALLQ13021 153 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 GK2Q14410 553 aaPredicted RBP12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 SLC22A6Q4U2R8 563 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 SFRP5Q5T4F7 317 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 FBXW9Q5XUX1 488 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 IDO2Q6ZQW0 420 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 TMEM104Q8NE00 496 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 PXT1Q8NFP0 134 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 BEST4Q8NFU0 473 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 FGFBP3Q8TAT2 258 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 PIGTQ969N2 578 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 APOBEC3DQ96AK3 386 aaPredicted RBP12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 BORCS8Q96FH0 119 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 TMEM246Q9BRR3 403 aa12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 ZMAT3Q9HA38 289 aaKnown RBP12.85□□□□□ -0.35
ECHDC1-220ENST00000528402 DNAJC13O75165 2243 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 WIPF3A6NGB9 483 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 MFNGO00587 321 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 AQP7O14520 342 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 CNOT4O95628 575 aaKnown RBP12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 IFNA6P05013 189 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 GIPP09681 153 aaPredicted RBP12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 PATE4P0C8F1 98 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 GSTT2P0CG29 244 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 MGMTP16455 207 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 GNB3P16520 340 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 ANXA7P20073 488 aaKnown RBP12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 ANOS1P23352 680 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 OR3A2P47893 321 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 NOVA1P51513 510 aaKnown RBP12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 RAP2BP61225 183 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 MPPED2Q15777 294 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 FAHD2BQ6P2I3 314 aaPredicted RBP12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 P4HA3Q7Z4N8 544 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 CPEB3Q8NE35 698 aaKnown RBP12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 CSNK2A3Q8NEV1 391 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 OR4D10Q8NGI6 311 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 ZNF431Q8TF32 576 aaPredicted RBP12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 DVL3Q92997 716 aaPredicted RBP12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 FAHD2AQ96GK7 314 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 SCGB3A2Q96PL1 93 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 BEX1Q9HBH7 125 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 DLL4Q9NR61 685 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 IL36GQ9NZH8 169 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 ZNF69Q9UC07 566 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 LIPGQ9Y5X9 500 aa12.84□□□□□ -0.35
ECHDC1-220ENST00000528402 TMEM82A0PJX8 343 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 OR14I1A6ND48 311 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 FOXI3A8MTJ6 420 aaPredicted RBP12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 PRSS44E7EML9 344 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 SS18L1O75177 396 aaPredicted RBP12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 ATP6V1G1O75348 118 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 OR2A4O95047 310 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 IGHV3-9P01782 118 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 CSTBP04080 98 aaKnown RBP12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 TMEM225BP0DP42 221 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 HOXB1P14653 301 aaPredicted RBP12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 CXCL3P19876 107 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 C4BPBP20851 252 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 ACKR3P25106 362 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 AGTR1P30556 359 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 TMEM50BP56557 158 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 ZP1P60852 638 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 RAB1AP62820 205 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 HGFACQ04756 655 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 SF3B4Q15427 424 aaKnown RBP eCLIP12.83□□□□□ -0.361e-9■■■■■ 43.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms