RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ZDHHC23Q8IYP9 409 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 BCL6BQ8N143 479 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-213ENST00000527897 SIGLECL1Q8N7X8 197 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 OR51E1Q8TCB6 317 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 RPL3LQ92901 407 aaKnown RBP12.93□□□□□ -0.34
CAPN1-213ENST00000527897 PPP1R14AQ96A00 147 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 ITPKCQ96DU7 683 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 SEH1LQ96EE3 360 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 ADGRL4Q9HBW9 690 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 GPR84Q9NQS5 396 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 ZNF391Q9UJN7 358 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 ZNF816-ZNF321PA0A0X1KG74 233 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 LOC110117498-PIK3R3F6TDL0 507 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 HAX1O00165 279 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 TMPRSS2O15393 492 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 NDUFA2O43678 99 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 ENSAO43768 121 aaKnown RBP12.92□□□□□ -0.34
CAPN1-213ENST00000527897 ZNF254O75437 659 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 CST4P01036 141 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 IGHV4-38-2P0DP08 117 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 ATP6V1E1P36543 226 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 NPY4RP50391 375 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 GPM6AP51674 278 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 FGF12P61328 243 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 ROM1Q03395 351 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 GALNT4Q8N4A0 578 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 OR5T2Q8NGG2 359 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 OR5P3Q8WZ94 311 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 ST8SIA4Q92187 359 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 DUX5Q96PT3 197 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 CCL13Q99616 98 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 RBM4BQ9BQ04 359 aaKnown RBP12.92□□□□□ -0.34
CAPN1-213ENST00000527897 PCGF1Q9BSM1 259 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 OSBPL10Q9BXB5 764 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 RNPEPL1Q9HAU8 725 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 SMURF1Q9HCE7 757 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 ABCB9Q9NP78 766 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 SNTG1Q9NSN8 517 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 CLN6Q9NWW5 311 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 DNAJB11Q9UBS4 358 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 ORC6Q9Y5N6 252 aa12.92□□□□□ -0.34
CAPN1-213ENST00000527897 A0A0U1RQV5 110 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 KIR2DS1A0A191URI9 304 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 ACOD1A6NK06 481 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 DVL1O14640 695 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 AKR7A2O43488 359 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 RPP14O95059 124 aaKnown RBP12.91□□□□□ -0.34
CAPN1-213ENST00000527897 LHBP01229 141 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 FAHP16930 419 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 ACTR3P61158 418 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 EFNB1P98172 346 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 ZIK1Q3SY52 487 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-213ENST00000527897 WDR38Q5JTN6 314 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 BCL2L15Q5TBC7 163 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 TEX36Q5VZQ5 186 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 CD276Q5ZPR3 534 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 MOB3CQ70IA8 216 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 SCCPDHQ8NBX0 429 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 HPSE2Q8WWQ2 592 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 GABARAPL3Q9BY60 117 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 ESM1Q9NQ30 184 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 IMPAD1Q9NX62 359 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 WARS2Q9UGM6 360 aaKnown RBP12.91□□□□□ -0.34
CAPN1-213ENST00000527897 PIGLQ9Y2B2 252 aa12.91□□□□□ -0.34
CAPN1-213ENST00000527897 A0A1B0GW55 424 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 TMEM210A6NLX4 147 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 ZNF732B4DXR9 585 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 H3BSH0 61 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 EI24O14681 340 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 KRT8P05787 483 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 DUX4L2P0CJ85 424 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 DUX4L3P0CJ86 424 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 DUX4L4P0CJ87 422 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 DUX4L5P0CJ88 424 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 DUX4L6P0CJ89 424 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 DUX4L7P0CJ90 424 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 DCTDP32321 178 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 CDC42P60953 191 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 RIPPLY1Q0D2K3 151 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 IKZF1Q13422 519 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 ODF4Q2M2E3 257 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 PLCXD3Q63HM9 321 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 DUX4L9Q6RFH8 374 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-213ENST00000527897 C12orf54Q6X4T0 127 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 SSX6Q7RTT6 188 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 FGFRL1Q8N441 504 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 YIPF7Q8N8F6 280 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 OR10H4Q8NGA5 316 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 ZFAND2BQ8WV99 257 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 GCDHQ92947 438 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-213ENST00000527897 UPRTQ96BW1 309 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 MNTQ99583 582 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 FGF23Q9GZV9 251 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-213ENST00000527897 WDR13Q9H1Z4 485 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 DUX4Q9UBX2 424 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 NUFIP1Q9UHK0 495 aaKnown RBP12.9□□□□□ -0.34
CAPN1-213ENST00000527897 OR52A1Q9UKL2 312 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 SOX21Q9Y651 276 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-213ENST00000527897 R4GMQ9 66 aa12.9□□□□□ -0.34
CAPN1-213ENST00000527897 H3BNX3 289 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms