RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 COMTD1Q86VU5 262 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 Q8IYB0 196 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 TP53TG5Q9Y2B4 290 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 I3L521 148 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 ZIC2O95409 532 aaPredicted RBP13.31□□□□□ -0.28
USP47-207ENST00000527733 GABRB1P18505 474 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 OXA1LQ15070 435 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 ZNF239Q16600 458 aaKnown RBP13.31□□□□□ -0.28
USP47-207ENST00000527733 PHLDA2Q53GA4 152 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 BHLHA15Q7RTS1 189 aaPredicted RBP13.31□□□□□ -0.28
USP47-207ENST00000527733 HES7Q9BYE0 225 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 OR2H1Q9GZK4 316 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 FLVCR1Q9Y5Y0 555 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 PRR19A6NJB7 356 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 PHF1O43189 567 aaPredicted RBP13.31□□□□□ -0.28
USP47-207ENST00000527733 SPRY3O43610 288 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 UPK3AO75631 287 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 TUSC2O75896 110 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 FUT3P21217 361 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 SSBP1Q04837 148 aaKnown RBP13.31□□□□□ -0.28
USP47-207ENST00000527733 OR2Z1Q8NG97 314 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 HEATR5BQ9P2D3 2071 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 TOR1AO14656 332 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 CD3DP04234 171 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 MMP15P51511 669 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 KCNJ8Q15842 424 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 PNLIPRP3Q17RR3 467 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 FAM27BQ5VT28 67 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 ZNF546Q86UE3 836 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 NFAM1Q8NET5 270 aaPredicted RBP13.31□□□□□ -0.28
USP47-207ENST00000527733 RANGRFQ9HD47 186 aaPredicted RBP13.31□□□□□ -0.28
USP47-207ENST00000527733 EDARQ9UNE0 448 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 LRP5LA4QPB2 252 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 TRIM64A6NGJ6 449 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 C9orf172C9J069 976 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 RFX2P48378 723 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 RPP30P78346 268 aaKnown RBP13.31□□□□□ -0.28
USP47-207ENST00000527733 FCN2Q15485 313 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 CATSPERDQ86XM0 798 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 STOML3Q8TAV4 291 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 C22orf15Q8WYQ4 148 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 SGK3Q96BR1 496 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 SEC22AQ96IW7 307 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 WDFY2Q96P53 400 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 AUNIPQ9H7T9 357 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 HRASLSQ9HDD0 168 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 NPAP1Q9NZP6 1156 aa13.31□□□□□ -0.28
USP47-207ENST00000527733 CEBPZOSA8MTT3 80 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 SDCBPO00560 298 aaPredicted RBP13.3□□□□□ -0.28
USP47-207ENST00000527733 IFNA17P01571 189 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 UMODP07911 640 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 HOXD4P09016 255 aaPredicted RBP13.3□□□□□ -0.28
USP47-207ENST00000527733 NFYAP23511 347 aaPredicted RBP13.3□□□□□ -0.28
USP47-207ENST00000527733 OR52N4Q8NGI2 321 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 SEH1LQ96EE3 360 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 SEC22CQ9BRL7 303 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 ZNF2Q9BSG1 426 aaPredicted RBP13.3□□□□□ -0.28
USP47-207ENST00000527733 C12orf4Q9NQ89 552 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 CHCHD2Q9Y6H1 151 aaPredicted RBP13.3□□□□□ -0.28
USP47-207ENST00000527733 PLXNA4Q9HCM2 1894 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 AHRRA9YTQ3 701 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 IL3RAP26951 378 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 LGI3Q8N145 548 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 DMBX1Q8NFW5 382 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 OR6K3Q8NGY3 331 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 SLAMF9Q96A28 289 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 OR5V1Q9UGF6 321 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 MPC1Q9Y5U8 109 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 LOC102723996A0A087X1L8 192 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 WDR1O75083 606 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 RAB31Q13636 194 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 BAK1Q16611 211 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 ALKBH6Q3KRA9 238 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 TIPARPQ7Z3E1 657 aaKnown RBP13.3□□□□□ -0.28
USP47-207ENST00000527733 LRRC20Q8TCA0 184 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 CMBLQ96DG6 245 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 TAS2R3Q9NYW6 316 aa13.3□□□□□ -0.28
USP47-207ENST00000527733 ARPC4-TTLL3A0A0A6YYG9 625 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 C17orf51A8MQB3 221 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 OR5H8P0DN80 308 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 SORDQ00796 357 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 SCCPDHQ8NBX0 429 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 SLC25A31Q9H0C2 315 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 PLEKHF2Q9H8W4 249 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 FN3KRPQ9HA64 309 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 KLK11Q9UBX7 282 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 TMEM200CA6NKL6 621 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 OR5B21A6NL26 309 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 TRIM64CA6NLI5 447 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 MS4A18H0YCH9 400 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 SLC33A1O00400 549 aaPredicted RBP13.29□□□□□ -0.28
USP47-207ENST00000527733 LALBAP00709 142 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 MS4A18Q3C1V0 323 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 ZNF767PQ75MW2 155 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 FAM214BQ7L5A3 538 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 FDCSPQ8NFU4 85 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 KCNK17Q96T54 332 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 AIFM2Q9BRQ8 373 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 H3BMH7 237 aa13.29□□□□□ -0.28
USP47-207ENST00000527733 H7C2Y5 167 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms