RNA–Protein interactions for RNA: ENST00000527646.5

VPS51-204, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS51, Length 2,144 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-204ENST00000527646 PGA3P0DJD8 388 aa16.58■□□□□ 0.24
VPS51-204ENST00000527646 IGFBP3P17936 291 aaPredicted RBP16.58■□□□□ 0.24
VPS51-204ENST00000527646 CYCSP99999 105 aaKnown RBP16.58■□□□□ 0.24
VPS51-204ENST00000527646 PDZK1IP1Q13113 114 aa16.58■□□□□ 0.24
VPS51-204ENST00000527646 ASPHD2Q6ICH7 369 aa16.58■□□□□ 0.24
VPS51-204ENST00000527646 DEGS2Q6QHC5 323 aa16.58■□□□□ 0.24
VPS51-204ENST00000527646 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.58■□□□□ 0.24
VPS51-204ENST00000527646 LINC00346Q8IVM7 164 aa16.58■□□□□ 0.24
VPS51-204ENST00000527646 PIGQQ9BRB3 760 aa16.58■□□□□ 0.24
VPS51-204ENST00000527646 GPR87Q9BY21 358 aa16.58■□□□□ 0.24
VPS51-204ENST00000527646 CST11Q9H112 138 aa16.58■□□□□ 0.24
VPS51-204ENST00000527646 CHMP1AQ9HD42 196 aaPredicted RBP16.58■□□□□ 0.24
VPS51-204ENST00000527646 TREM1Q9NP99 234 aa16.58■□□□□ 0.24
VPS51-204ENST00000527646 UQCC1Q9NVA1 299 aa16.58■□□□□ 0.24
VPS51-204ENST00000527646 MYEF2Q9P2K5 600 aaKnown RBP16.58■□□□□ 0.24
VPS51-204ENST00000527646 C21orf140B9A014 251 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 LDLRAD4O15165 306 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 TLX3O43711 291 aaPredicted RBP16.57■□□□□ 0.24
VPS51-204ENST00000527646 EIF1BO60739 113 aaKnown RBP16.57■□□□□ 0.24
VPS51-204ENST00000527646 CRHP06850 196 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 LAP3P28838 519 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 ACER2Q5QJU3 275 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 ST7LQ8TDW4 575 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 PCDHGA1Q9Y5H4 931 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 R4GMQ9 66 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 ZNF814B7Z6K7 855 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 ZIC3O60481 467 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 DUS4LO95620 317 aaKnown RBP16.57■□□□□ 0.24
VPS51-204ENST00000527646 PGAM2P15259 253 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 CSNK2A1P68400 391 aaPredicted RBP16.57■□□□□ 0.24
VPS51-204ENST00000527646 PJVKQ0ZLH3 352 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 PLEKHN1Q494U1 663 aaPredicted RBP16.57■□□□□ 0.24
VPS51-204ENST00000527646 CDNFQ49AH0 187 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 CATSPERDQ86XM0 798 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 RXFP4Q8TDU9 374 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 ASB5Q8WWX0 329 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 C11orf40Q8WZ69 217 aa16.57■□□□□ 0.24
VPS51-204ENST00000527646 CMSS1Q9BQ75 279 aaKnown RBP16.57■□□□□ 0.24
VPS51-204ENST00000527646 GJE1A6NN92 205 aa16.56■□□□□ 0.24
VPS51-204ENST00000527646 NR2C1P13056 603 aa16.56■□□□□ 0.24
VPS51-204ENST00000527646 FOLR2P14207 255 aa16.56■□□□□ 0.24
VPS51-204ENST00000527646 RAB6AP20340 208 aa16.56■□□□□ 0.24
VPS51-204ENST00000527646 NPBWR1P48145 328 aa16.56■□□□□ 0.24
VPS51-204ENST00000527646 CX3CR1P49238 355 aa16.56■□□□□ 0.24
VPS51-204ENST00000527646 DHRS13Q6UX07 377 aa16.56■□□□□ 0.24
VPS51-204ENST00000527646 NMES1Q9C002 83 aa16.56■□□□□ 0.24
VPS51-204ENST00000527646 SDK2Q58EX2 2172 aa16.56■□□□□ 0.24
VPS51-204ENST00000527646 MEX3AA1L020 520 aaKnown RBP16.55■□□□□ 0.24
VPS51-204ENST00000527646 METTL21EPA6NDL7 271 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 VAMP5O95183 116 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 S100A8P05109 93 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 CSN2P05814 226 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 H2BFMP0C1H6 154 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 DNASE1L1P49184 302 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 CYB561P49447 251 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 NKPD1Q17RQ9 610 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 CARD17Q5XLA6 110 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 CD163Q86VB7 1156 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 OR4A4PQ8NGN8 299 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 AQP3Q92482 292 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 DCUN1D4Q92564 292 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 NAA11Q9BSU3 229 aaPredicted RBP16.55■□□□□ 0.24
VPS51-204ENST00000527646 SEC61A2Q9H9S3 476 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 CENPMQ9NSP4 180 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 TAS2R4Q9NYW5 299 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 POLR1DQ9Y2S0 133 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 EMC9Q9Y3B6 208 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 CSAG2Q9Y5P2 127 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 MRPS18BQ9Y676 258 aaKnown RBP16.55■□□□□ 0.24
VPS51-204ENST00000527646 GALR2O43603 387 aaPredicted RBP16.55■□□□□ 0.24
VPS51-204ENST00000527646 SMIM6P0DI80 62 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 LIPCP11150 499 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 KCNJ3P48549 501 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 RAB5BP61020 215 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 RAC1P63000 192 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 SRSF3P84103 164 aaKnown RBP16.55■□□□□ 0.24
VPS51-204ENST00000527646 HES3Q5TGS1 186 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 AWAT2Q6E213 333 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 CORO6Q6QEF8 472 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 RNF133Q8WVZ7 376 aa16.55■□□□□ 0.24
VPS51-204ENST00000527646 SAT2Q96F10 170 aaPredicted RBP16.55■□□□□ 0.24
VPS51-204ENST00000527646 TMEM269A0A1B0GVZ9 245 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 A0A1W2PNU3 283 aaPredicted RBP16.54■□□□□ 0.24
VPS51-204ENST00000527646 C5orf51A6NDU8 294 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 DBX1A6NMT0 343 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 EEF1E1-BLOC1S5C9J1V9 151 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 RAMP1O60894 148 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 TBPP20226 339 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 PAX6P26367 422 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 SRD5A2P31213 254 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 H3F3AP84243 136 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 C1orf100Q5SVJ3 147 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 RHOUQ7L0Q8 258 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 PAQR4Q8N4S7 273 aaPredicted RBP16.54■□□□□ 0.24
VPS51-204ENST00000527646 OR4S1Q8NGB4 309 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 NKX3-1Q99801 234 aaPredicted RBP16.54■□□□□ 0.24
VPS51-204ENST00000527646 RNF122Q9H9V4 155 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 ZMAT3Q9HA38 289 aaKnown RBP16.54■□□□□ 0.24
VPS51-204ENST00000527646 TMEM235A6NFC5 223 aa16.54■□□□□ 0.24
VPS51-204ENST00000527646 SRSF10O75494 262 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms