RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 ZMAT3Q9HA38 289 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-235ENST00000522730 ZNF556Q9HAH1 456 aa8.5□□□□□ -1.05
CTNNA1-235ENST00000522730 SMURF1Q9HCE7 757 aa8.5□□□□□ -1.05
CTNNA1-235ENST00000522730 CMC2Q9NRP2 79 aa8.5□□□□□ -1.05
CTNNA1-235ENST00000522730 DNAJB11Q9UBS4 358 aa8.5□□□□□ -1.05
CTNNA1-235ENST00000522730 RHBDD3Q9Y3P4 386 aa8.5□□□□□ -1.05
CTNNA1-235ENST00000522730 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 ZNF850A8MQ14 1090 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 ZNF879B4DU55 563 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 PRR23D1E9PI22 279 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 DVL1O14640 695 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 CDIPTO14735 213 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 NDUFA2O43678 99 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 SELENOFO60613 162 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 MITFO75030 526 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 GLCEO94923 617 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 APOC1P02654 83 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 PRR23D2P0DMB1 279 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 MDKP21741 143 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 CFHR2P36980 270 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 NAA10P41227 235 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 IKZF1Q13422 519 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 MICBQ29980 383 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 LINC01590Q5TEZ4 76 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 TMEM236Q5W0B7 351 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 CD300LDQ6UXZ3 194 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 SHFQ7M4L6 423 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 CPOQ8IVL8 374 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 FGFRL1Q8N441 504 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 GCSAMQ8N6F7 178 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 OR1M1Q8NGA1 313 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 RNF133Q8WVZ7 376 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 DNAJC9Q8WXX5 260 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 PIGCQ92535 297 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 DACT3Q96B18 629 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 TMIGD2Q96BF3 282 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 WDFY2Q96P53 400 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 MICU1Q9BPX6 476 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 PAPOLGQ9BWT3 736 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 VCXQ9H320 206 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 TOR3AQ9H497 397 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 OPA3Q9H6K4 179 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 TRIM36Q9NQ86 728 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 PAPOLBQ9NRJ5 636 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 KRT84Q9NSB2 600 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 SNTG1Q9NSN8 517 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 ZNF319Q9P2F9 582 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 ONECUT1Q9UBC0 465 aa8.49□□□□□ -1.05
CTNNA1-235ENST00000522730 CENPVL3A0A0U1RRI6 287 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 A0A1B0GW55 424 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 A0A1W2PRD5 423 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 A0A1W2PRF3 423 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 A0A1W2PRM7 423 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 P2RY10O00398 339 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 DLGAP1O14490 977 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 TNFRSF13BO14836 293 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 TFF1P04155 84 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 HMGN1P05114 100 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 LIPFP07098 398 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 DUX4L2P0CJ85 424 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 DUX4L3P0CJ86 424 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 DUX4L4P0CJ87 422 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 DUX4L5P0CJ88 424 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 DUX4L6P0CJ89 424 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 DUX4L7P0CJ90 424 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 OPRL1P41146 370 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 AQP4P55087 323 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 IL13RA1P78552 427 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 PRB3Q04118 309 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 DUX4L9Q6RFH8 374 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 FIP1L1Q6UN15 594 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 IZUMO2Q6UXV1 221 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 C9orf139Q6ZV77 190 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 WDR86Q86TI4 376 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 C11orf53Q8IXP5 236 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 TIGD4Q8IY51 512 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 SCCPDHQ8NBX0 429 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 OR52H1Q8NGJ2 320 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 GATAD2BQ8WXI9 593 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 RPL3LQ92901 407 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 SPSB4Q96A44 273 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 HIST1H2AAQ96QV6 131 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 TBX15Q96SF7 602 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 CNTD2Q9H8S5 307 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 DUX4Q9UBX2 424 aa8.48□□□□□ -1.05
CTNNA1-235ENST00000522730 hCG_38984A0A1B0GV85 526 aa8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 ANXA2P2A6NMY6 339 aa8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 SRRM5B3KS81 715 aa8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 H0YJX3 145 aa8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 CLDN34H7C241 214 aa8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 PSMD9O00233 223 aa8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 NDUFB3O43676 98 aa8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 PTBP3O95758 552 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 LHBP01229 141 aa8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 LYNP07948 512 aa8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 MRPL3P09001 348 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 OSMP13725 252 aa8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 CFL1P23528 166 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 SRSF4Q08170 494 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-235ENST00000522730 PRDX4Q13162 271 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms