RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 DDX19BQ9UMR2 479 aa2.79□□□□□ -1.96
HMGB1P1-201ENST00000522557 KLF12Q9Y4X4 402 aa2.79□□□□□ -1.96
HMGB1P1-201ENST00000522557 SCN1AP35498 2009 aa2.79□□□□□ -1.96
HMGB1P1-201ENST00000522557 ZC3H13Q5T200 1668 aaKnown RBP2.79□□□□□ -1.96
HMGB1P1-201ENST00000522557 ARHGEF5Q12774 1597 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 TIAM1Q13009 1591 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 NWD1Q149M9 1564 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 DAPK1P53355 1430 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 ARHGEF10O15013 1369 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 RSPH10B2B2RC85 870 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 H0YJW9 148 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 TNFRSF11BO00300 401 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 TAAR5O14804 337 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 B4GALT5O43286 388 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 ENTPD5O75356 428 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 SLC25A14O95258 325 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 PLEKHA8P1O95397 391 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 RSPH10BP0C881 870 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 PSMC3P17980 439 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 PGAM1P18669 254 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 CRADDP78560 199 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 SLAQ13239 276 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 EBI3Q14213 229 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 ZNF266Q14584 549 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 RNASE13Q5GAN3 156 aaKnown RBP2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 LIN9Q5TKA1 542 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 KHDRBS2Q5VWX1 349 aaKnown RBP2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 STEAP4Q687X5 459 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 RAB43Q86YS6 212 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 PGAM4Q8N0Y7 254 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 WDR31Q8NA23 367 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 TMEM104Q8NE00 496 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 CIRBP-AS1Q8TBR5 109 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 ESR2Q92731 530 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 HAUS1Q96CS2 278 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 C19orf60Q96EN9 201 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 TOLLIPQ9H0E2 274 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 XKR8Q9H6D3 395 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 ZNF430Q9H8G1 570 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 TMEM27Q9HBJ8 222 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 C8orf17Q9NRJ1 99 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 ZNF355PQ9NSJ1 428 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 RBFOX1Q9NWB1 397 aaKnown RBP2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 STMN3Q9NZ72 180 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 ADA2Q9NZK5 511 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 CES1P1Q9UKY3 287 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 PSG11Q9UQ72 335 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 PIK3C2BO00750 1634 aa2.78□□□□□ -1.96
HMGB1P1-201ENST00000522557 TRPM2O94759 1503 aa2.78□□□□□ -1.97
HMGB1P1-201ENST00000522557 LMTK2Q8IWU2 1503 aa2.78□□□□□ -1.97
HMGB1P1-201ENST00000522557 HFM1A2PYH4 1435 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 XIRP1Q702N8 1843 aaKnown RBP2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 DHX57Q6P158 1386 aaKnown RBP2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 KDM5AP29375 1690 aaKnown RBP2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 SHPRHQ149N8 1683 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 SMIM26A0A096LP01 95 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 CENPXA8MT69 81 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 HACD1B0YJ81 288 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 NDUFS8O00217 210 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 RNF113AO15541 343 aaKnown RBP2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 CHMP2AO43633 222 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 CISD3P0C7P0 127 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 DTYMKP23919 212 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 CXCR1P25024 350 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 PSMC5P62195 406 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 YWHAEP62258 255 aaKnown RBP2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 CDK5Q00535 292 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 SIGLEC14Q08ET2 396 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 TCEAL5Q5H9L2 206 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 CD300LGQ6UXG3 332 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 RIMKLAQ8IXN7 391 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 SNX31Q8N9S9 440 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 OR4K5Q8NGD3 323 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 UBALD1Q8TB05 177 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 TMEM234Q8WY98 164 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 TCEAL3Q969E4 200 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 ZNF488Q96MN9 340 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 OSBPL11Q9BXB4 747 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 TM6SF2Q9BZW4 377 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 MYOZ1Q9NP98 299 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 DDX19AQ9NUU7 478 aaKnown RBP2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 CTSFQ9UBX1 484 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 VAX2Q9UIW0 290 aa2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 YTHDF2Q9Y5A9 579 aaKnown RBP2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 COL27A1Q8IZC6 1860 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 CHD2O14647 1828 aaKnown RBP2.77□□□□□ -1.97
HMGB1P1-201ENST00000522557 ABCC11Q96J66 1382 aa2.76□□□□□ -1.97
HMGB1P1-201ENST00000522557 TMEM131Q92545 1883 aa2.76□□□□□ -1.97
HMGB1P1-201ENST00000522557 MAST1Q9Y2H9 1570 aa2.76□□□□□ -1.97
HMGB1P1-201ENST00000522557 CCL15-CCL14A0A0B4J2E2 113 aa2.76□□□□□ -1.97
HMGB1P1-201ENST00000522557 SYCE1LA8MT33 242 aa2.76□□□□□ -1.97
HMGB1P1-201ENST00000522557 POLR1CO15160 346 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P1-201ENST00000522557 TRAPPC6AO75865 159 aa2.76□□□□□ -1.97
HMGB1P1-201ENST00000522557 SLC22A5O76082 557 aa2.76□□□□□ -1.97
HMGB1P1-201ENST00000522557 GCGP01275 180 aa2.76□□□□□ -1.97
HMGB1P1-201ENST00000522557 IGLV2-8P01709 118 aa2.76□□□□□ -1.97
HMGB1P1-201ENST00000522557 TRBV12-3P01733 135 aa2.76□□□□□ -1.97
HMGB1P1-201ENST00000522557 APCSP02743 223 aa2.76□□□□□ -1.97
HMGB1P1-201ENST00000522557 CD74P04233 296 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms