RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 IRF4Q15306 451 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 MLF2Q15773 248 aaPredicted RBP4.24□□□□□ -1.73
CNOT8-220ENST00000522139 ZNF77Q15935 545 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 LGALSLQ3ZCW2 172 aaPredicted RBP4.24□□□□□ -1.73
CNOT8-220ENST00000522139 CCSMST1Q4G0I0 132 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 SMUG1Q53HV7 270 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 DCAF12Q5T6F0 453 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 GFI1BQ5VTD9 330 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 RTL6Q6ICC9 239 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 ADAM5Q6NVV9 412 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 TFAP2EQ6VUC0 442 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 RTL4Q6ZR62 310 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 TAF8Q7Z7C8 310 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 MARCH9Q86YJ5 346 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 OR2L13Q8N349 312 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 RNF175Q8N4F7 328 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 RELL2Q8NC24 303 aaPredicted RBP4.24□□□□□ -1.73
CNOT8-220ENST00000522139 OR2L5Q8NG80 312 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 OR8D4Q8NGM9 314 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 OR2L8Q8NGY9 312 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 OR2T4Q8NH00 348 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 OR5W2Q8NH69 310 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 NT5CQ8TCD5 201 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 SKA2Q8WVK7 121 aaPredicted RBP4.24□□□□□ -1.73
CNOT8-220ENST00000522139 C11orf52Q96A22 123 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 MRPL38Q96DV4 380 aaKnown RBP4.24□□□□□ -1.73
CNOT8-220ENST00000522139 SMIM19Q96E16 107 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 PHYHIPLQ96FC7 376 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 MED8Q96G25 268 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 SMIM10Q96HG1 83 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 ALKBH3Q96Q83 286 aaPredicted RBP4.24□□□□□ -1.73
CNOT8-220ENST00000522139 RAB40CQ96S21 281 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 GPX7Q96SL4 187 aaPredicted RBP4.24□□□□□ -1.73
CNOT8-220ENST00000522139 SECISBP2Q96T21 854 aaKnown RBP4.24□□□□□ -1.73
CNOT8-220ENST00000522139 TEAD3Q99594 435 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 OPRPNQ99935 248 aaPredicted RBP4.24□□□□□ -1.73
CNOT8-220ENST00000522139 PRSS27Q9BQR3 290 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 PLA2G12AQ9BZM1 189 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 ZNF436Q9C0F3 470 aaPredicted RBP4.24□□□□□ -1.73
CNOT8-220ENST00000522139 OR51B5Q9H339 312 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 OR51I1Q9H343 314 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 LRRN3Q9H3W5 708 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 MDFICQ9P1T7 246 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 COMMD3Q9UBI1 195 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 EXTL2Q9UBQ6 330 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 DUX4Q9UBX2 424 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 CLEC4EQ9ULY5 219 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 DNAH12Q6ZR08 3092 aa4.24□□□□□ -1.73
CNOT8-220ENST00000522139 PCNTO95613 3336 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 SRCAPQ6ZRS2 3230 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 IGHV3-38A0A0C4DH36 116 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 ANKRD20A5PA0PJZ0 165 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 TRABD2BA6NFA1 517 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 MFSD2BA6NFX1 497 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 ZSCAN5BA6NJL1 495 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 C12orf71A8MTZ7 269 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 ZNF879B4DU55 563 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 AIPO00170 330 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 PRRG1O14668 218 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 CHEK1O14757 476 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 MT-ATP6P00846 226 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 HMGN2P05204 90 aaKnown RBP4.23□□□□□ -1.73
CNOT8-220ENST00000522139 HOXD4P09016 255 aaPredicted RBP4.23□□□□□ -1.73
CNOT8-220ENST00000522139 RAB3BP20337 219 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 MAGP20916 626 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 NT5EP21589 574 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 DRD5P21918 477 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 ATP5A1P25705 553 aaKnown RBP4.23□□□□□ -1.73
CNOT8-220ENST00000522139 GABRR2P28476 465 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 LCN1P31025 176 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 FCGR2BP31994 310 aaPredicted RBP4.23□□□□□ -1.73
CNOT8-220ENST00000522139 FCGR2CP31995 323 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 EVI2BP34910 448 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 GPR4P46093 362 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 ARPP19P56211 112 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 TAS2R41P59536 307 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 HILS1P60008 231 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 RPL27P61353 136 aaKnown RBP4.23□□□□□ -1.73
CNOT8-220ENST00000522139 STXBP1P61764 594 aaKnown RBP4.23□□□□□ -1.73
CNOT8-220ENST00000522139 STX4Q12846 297 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 BIKQ13323 160 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 SNTB2Q13425 540 aaKnown RBP4.23□□□□□ -1.73
CNOT8-220ENST00000522139 ENPP2Q13822 863 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 NUMA1Q14980 2115 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 ZMYND11Q15326 602 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 FCN2Q15485 313 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 SYPL1Q16563 259 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 CARTPTQ16568 116 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 AANATQ16613 207 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 HNRNPA1L2Q32P51 320 aaKnown RBP4.23□□□□□ -1.73
CNOT8-220ENST00000522139 UBE2NLQ5JXB2 153 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 ZNF684Q5T5D7 378 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 OR2G6Q5TZ20 316 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 LPCAT3Q6P1A2 487 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 TNFAIP8L2Q6P589 184 aaPredicted RBP4.23□□□□□ -1.73
CNOT8-220ENST00000522139 PAQR6Q6TCH4 344 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 UQCC3Q6UW78 93 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 ANGPTL8Q6UXH0 198 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 LRRN1Q6UXK5 716 aa4.23□□□□□ -1.73
CNOT8-220ENST00000522139 RFLNAQ6ZTI6 216 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms