RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CCDC88CQ9P219 2028 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 MAP1BP46821 2468 aaKnown RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 PKD1L2Q7Z442 2459 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 TRAV27A0A087WT01 109 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 A0A1W2PRG6 482 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 A6NIZ1 184 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 OR6C65A6NJZ3 312 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 CENPBD1B2RD01 187 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 C11orf98E9PRG8 122 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 IMPA2O14732 288 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ARPC3O15145 178 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 RNF13O43567 381 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 TRAF3IP2O43734 574 aaPredicted RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 DFFBO76075 338 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 TXNDC12O95881 172 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 IGHMP01871 453 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 POU2F1P14859 743 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ANPEPP15144 967 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ACADSP16219 412 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 GSTM3P21266 225 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 RPL4P36578 427 aaKnown RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 OR3A2P47893 321 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 DAPP51397 102 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 BIDP55957 195 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 DSCR10P59022 87 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 RAP1BP61224 184 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 RPL27P61353 136 aaKnown RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 RAP1AP62834 184 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ERVK-25P63136 954 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ELF3P78545 371 aaPredicted RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 IL1RL1Q01638 556 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 SCN1BQ07699 218 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 RIPK1Q13546 671 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 RCN1Q15293 331 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ACKR1Q16570 336 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 PDLIM3Q53GG5 364 aaPredicted RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 TSPO2Q5TGU0 170 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 FBXW9Q5XUX1 488 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 RPL13AP3Q6NVV1 102 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 NIPAL3Q6P499 406 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 SMARCD3Q6STE5 483 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 FIP1L1Q6UN15 594 aaKnown RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 TFAP2EQ6VUC0 442 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ZNF620Q6ZNG0 422 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 SLC35D2Q76EJ3 337 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 FAM122BQ7Z309 247 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 HDDC2Q7Z4H3 204 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 SH2D6Q7Z4S9 175 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ABHD12BQ7Z5M8 362 aaPredicted RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 LRRTM1Q86UE6 522 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 RTN4RL2Q86UN3 420 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 C20orf196Q8IYI0 205 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ZNF100Q8IYN0 542 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 HS3ST5Q8IZT8 346 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 GCNT2Q8N0V5 402 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 TMEM123Q8N131 208 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 PARP8Q8N3A8 854 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 SVOPLQ8N434 492 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ARIH2OSQ8N7S6 290 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 THAP8Q8NA92 274 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 OR9Q2Q8NGE9 314 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 OR5AP2Q8NGF4 316 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 OR6N1Q8NGY5 312 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 OR52N5Q8NH56 324 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 OR6X1Q8NH79 312 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ZNF519Q8TB69 540 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 SSC4DQ8WTU2 575 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 CA5BP1Q8WTZ4 195 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 DNAJC9Q8WXX5 260 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 RNASE6Q93091 150 aaKnown RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 TMEM54Q969K7 222 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 APH1AQ96BI3 265 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 SLC25A44Q96H78 314 aaPredicted RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 C18orf12Q96KH6 178 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 SAMD8Q96LT4 415 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 Q96M85 177 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 MUS81Q96NY9 551 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 OR2M2Q96R28 347 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 GPX7Q96SL4 187 aaPredicted RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 NIPSNAP1Q9BPW8 284 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ALG12Q9BV10 488 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 KATNB1Q9BVA0 655 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 TSSK6Q9BXA6 273 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 MRPL13Q9BYD1 178 aaKnown RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 LINC00470Q9BZP3 86 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 GABARAPL1Q9H0R8 117 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 OPN3Q9H1Y3 402 aaPredicted RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 OR52D1Q9H346 318 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 TXNIPQ9H3M7 391 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 FN3KQ9H479 309 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 DCLRE1BQ9H816 532 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 CDH20Q9HBT6 801 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 Q9N2K0 584 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 C8orf4Q9NR00 106 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 CHCHD3Q9NX63 227 aaKnown RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 MED29Q9NX70 200 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 IL20Q9NYY1 176 aa2.67□□□□□ -1.98
VPS13B-209ENST00000521559 STX18Q9P2W9 335 aaKnown RBP2.67□□□□□ -1.98
VPS13B-209ENST00000521559 ZNF346Q9UL40 294 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms