RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 EML5Q05BV3 1969 aa11.38□□□□□ -0.59
TRAPPC9-208ENST00000520857 WIPF3A6NGB9 483 aa11.38□□□□□ -0.59
TRAPPC9-208ENST00000520857 STMND1H3BQB6 276 aa11.38□□□□□ -0.59
TRAPPC9-208ENST00000520857 GSTP1P09211 210 aaKnown RBP11.38□□□□□ -0.59
TRAPPC9-208ENST00000520857 THEGLP0DJG4 465 aa11.38□□□□□ -0.59
TRAPPC9-208ENST00000520857 TMEM225BP0DP42 221 aa11.38□□□□□ -0.59
TRAPPC9-208ENST00000520857 HIST2H3AQ71DI3 136 aa11.38□□□□□ -0.59
TRAPPC9-208ENST00000520857 OR13G1Q8NGZ3 307 aa11.38□□□□□ -0.59
TRAPPC9-208ENST00000520857 TMEM234Q8WY98 164 aa11.38□□□□□ -0.59
TRAPPC9-208ENST00000520857 TMPRSS5Q9H3S3 457 aa11.38□□□□□ -0.59
TRAPPC9-208ENST00000520857 CACFD1Q9UGQ2 172 aa11.38□□□□□ -0.59
TRAPPC9-208ENST00000520857 CDC14BO60729 498 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 HKR1P10072 659 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 ACKR3P25106 362 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 CHATP28329 748 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 OPRM1P35372 400 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 HAAOP46952 286 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 SLC37A1P57057 533 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 GRINAQ7Z429 371 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 OR14K1Q8NGZ2 314 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 LIPHQ8WWY8 451 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 BADQ92934 168 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 PIGTQ969N2 578 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 TGIF2Q9GZN2 237 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 PARP11Q9NR21 331 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 PHF3Q92576 2039 aaKnown RBP11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 PRR19A6NJB7 356 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 LDLRAD4O15165 306 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 YKT6O15498 198 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 HSF1Q00613 529 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 OR2B11Q5JQS5 317 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 OGFOD3Q6PK18 319 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 LURAP1LQ8IV03 231 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 SUMF1Q8NBK3 374 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 EMG1Q92979 244 aaKnown RBP11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 MRPL24Q96A35 216 aaKnown RBP11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 PTX4Q96A99 478 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 REEP6Q96HR9 211 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 IGKV1D-43A0A0B4J1Z2 117 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 IGHV3-20A0A0C4DH32 117 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 TNFSF12O43508 249 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 ZNF217O75362 1048 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 JMJD7P0C870 316 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 GFERP55789 205 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 PLAC9Q5JTB6 97 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 CPEB2Q7Z5Q1 589 aaKnown RBP11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 PTPMT1Q8WUK0 201 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 FGF14Q92915 247 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 OCSTAMPQ9BR26 566 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 CHD7Q9P2D1 2997 aa11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 TMEM184BQ9Y519 407 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC9-208ENST00000520857 TCRBV21S2A2A0A5A6 115 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 TAGLN2P37802 199 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 UBE2KP61086 200 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 HAGHQ16775 308 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 TSPO2Q5TGU0 170 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 GGNBP1Q5YKI7 109 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 PLXDC2Q6UX71 529 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 FBXW12Q6X9E4 464 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 ZNF519Q8TB69 540 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 ADAMTS18Q8TE60 1221 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 DAZLQ92904 295 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 ADAM19Q9H013 955 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 NXT1Q9UKK6 140 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 WDR87Q6ZQQ6 2873 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 FAM221AA4D161 298 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 UBE2CO00762 179 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 GPR37O15354 613 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 RAD51DO75771 328 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 FCGR2AP12318 317 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 FOXL2P58012 376 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 FAM189A2Q15884 450 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 C10orf91Q5T1B1 145 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 H1FNTQ75WM6 255 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 SSX9Q7RTT3 188 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 OR10D4PQ8NGN7 298 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 C19orf12Q9NSK7 152 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 KLRF1Q9NZS2 232 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 A6NCN8 305 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 TNFRSF10CO14798 259 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 SEMA4FO95754 770 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 FCGR3AP08637 254 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 ZNF708P17019 499 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 ZNF121P58317 390 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 ERGIC1Q969X5 290 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 NELFAQ9H3P2 528 aa11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 METTL1Q9UBP6 276 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 RCL1Q9Y2P8 373 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-208ENST00000520857 TRBV6-7A0A0A0MS04 114 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 SFTPDP35247 375 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 GNMTQ14749 295 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 POC1AQ8NBT0 407 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 OR5L1Q8NGL2 311 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 HOXB13Q92826 284 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 SCARF2Q96GP6 870 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 MRGPRX1Q96LB2 322 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 SUSD2Q9UGT4 822 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 CYP8B1Q9UNU6 501 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms