RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 VAX2Q9UIW0 290 aa2.74□□□□□ -1.97
SQLE-204ENST00000520493 RAB23Q9ULC3 237 aa2.74□□□□□ -1.97
SQLE-204ENST00000520493 WIF1Q9Y5W5 379 aa2.74□□□□□ -1.97
SQLE-204ENST00000520493 V9GYY5 206 aaPredicted RBP2.74□□□□□ -1.97
SQLE-204ENST00000520493 KIAA0232Q92628 1395 aa2.74□□□□□ -1.97
SQLE-204ENST00000520493 IGHV1-69DA0A0B4J2H0 117 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 A0A1B0GUA9 196 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 FAM240AA0A1B0GVK7 77 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 SLC5A10A0PJK1 596 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 GOLGA8IPA6NC78 632 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 TAAR5O14804 337 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 CRXO43186 299 aaPredicted RBP2.73□□□□□ -1.97
SQLE-204ENST00000520493 CRTAPO75718 401 aaPredicted RBP2.73□□□□□ -1.97
SQLE-204ENST00000520493 INSP01308 110 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 HLA-DPB1P04440 258 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 ELK1P19419 428 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 RBMXP38159 391 aaKnown RBP2.73□□□□□ -1.97
SQLE-204ENST00000520493 EMP2P54851 167 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 PLTPP55058 493 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 MTPNP58546 118 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 UBE2G2P60604 165 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 CACNG7P62955 275 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 ARG2P78540 354 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 STX4Q12846 297 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 PSG7Q13046 419 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 FLOT2Q14254 428 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 PIGHQ14442 188 aaPredicted RBP2.73□□□□□ -1.97
SQLE-204ENST00000520493 ORMDL2Q53FV1 153 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 TFDP3Q5H9I0 405 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 SYT6Q5T7P8 510 aaPredicted RBP2.73□□□□□ -1.97
SQLE-204ENST00000520493 PLET1Q6UQ28 207 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 PLCZ1Q86YW0 608 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 RNF10Q8N5U6 811 aaKnown RBP2.73□□□□□ -1.97
SQLE-204ENST00000520493 C19orf18Q8NEA5 215 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 OR51Q1Q8NH59 317 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 ABHD3Q8WU67 409 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 EXOSC8Q96B26 276 aaKnown RBP2.73□□□□□ -1.97
SQLE-204ENST00000520493 VAT1Q99536 393 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 C20orf144Q9BQM9 153 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 EMC6Q9BV81 110 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 SLC25A39Q9BZJ4 359 aaPredicted RBP2.73□□□□□ -1.97
SQLE-204ENST00000520493 WDR54Q9H977 334 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 TMEM27Q9HBJ8 222 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 C1orf109Q9NX04 203 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 DEC1Q9P2X7 70 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 SCML1Q9UN30 329 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 TP53TG5Q9Y2B4 290 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 PPIL1Q9Y3C6 166 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 USH1CQ9Y6N9 552 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 SCN2AQ99250 2005 aa2.73□□□□□ -1.97
SQLE-204ENST00000520493 A0A0A6YYH2 397 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 A0A1B0GX12 115 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 A6NJ64 397 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 ZNF233A6NK53 670 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 M0QXV9 152 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 TNFRSF11BO00300 401 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 LAD1O00515 517 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 CDIPTO14735 213 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 MYL12BO14950 172 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 TNFAIP8O95379 198 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 MMP7P09237 267 aaPredicted RBP2.72□□□□□ -1.97
SQLE-204ENST00000520493 ZNF19P17023 458 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 TCN2P20062 427 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 CXCR1P25024 350 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 GGT2P36268 569 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 CXCL5P42830 114 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 ERFP50548 548 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 NDUFA8P51970 172 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 IRF4Q15306 451 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 MPPED2Q15777 294 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 TMEM249Q2WGJ8 235 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 CDNFQ49AH0 187 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 TCEAL5Q5H9L2 206 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 PTRHD1Q6GMV3 140 aaKnown RBP2.72□□□□□ -1.97
SQLE-204ENST00000520493 RTL4Q6ZR62 310 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 RNF175Q8N4F7 328 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 SPICQ8N5J4 248 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 DNAAF3Q8N9W5 541 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 OR5AK3PQ8NH89 298 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 NT5CQ8TCD5 201 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 PHF10Q8WUB8 498 aaKnown RBP2.72□□□□□ -1.97
SQLE-204ENST00000520493 RXFP2Q8WXD0 754 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 ING5Q8WYH8 240 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 TCEAL3Q969E4 200 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 C7orf50Q9BRJ6 194 aaKnown RBP2.72□□□□□ -1.97
SQLE-204ENST00000520493 UPF3BQ9BZI7 483 aaKnown RBP2.72□□□□□ -1.97
SQLE-204ENST00000520493 SPNS1Q9H2V7 528 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 HES2Q9Y543 173 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 TRANK1O15050 2925 aa2.72□□□□□ -1.97
SQLE-204ENST00000520493 ZNFX1Q9P2E3 1918 aaKnown RBP2.72□□□□□ -1.97
SQLE-204ENST00000520493 TET2Q6N021 2002 aaPredicted RBP2.71□□□□□ -1.98
SQLE-204ENST00000520493 IGLV11-55A0A075B6I3 123 aa2.71□□□□□ -1.98
SQLE-204ENST00000520493 IGHV3-66A0A0C4DH42 116 aa2.71□□□□□ -1.98
SQLE-204ENST00000520493 IGKV1-8A0A0C4DH67 115 aa2.71□□□□□ -1.98
SQLE-204ENST00000520493 FABP12A6NFH5 140 aa2.71□□□□□ -1.98
SQLE-204ENST00000520493 SMLR1H3BR10 107 aa2.71□□□□□ -1.98
SQLE-204ENST00000520493 DNASE2O00115 360 aaPredicted RBP2.71□□□□□ -1.98
SQLE-204ENST00000520493 PSPHP1O15172 72 aa2.71□□□□□ -1.98
SQLE-204ENST00000520493 TOX3O15405 576 aaPredicted RBP2.71□□□□□ -1.98
SQLE-204ENST00000520493 TRAF3IP2O43734 574 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms