RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 UTP23Q9BRU9 249 aaKnown RBP2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 FRMD8P1Q9BZ68 369 aaPredicted RBP2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 PRRG3Q9BZD7 231 aa2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 COA1Q9GZY4 146 aa2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 PLEKHA1Q9HB21 404 aa2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 SPACA1Q9HBV2 294 aa2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR2S2Q9NQN1 319 aa2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 RBFOX1Q9NWB1 397 aaKnown RBP2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 CD300AQ9UGN4 299 aa2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 CYB5R1Q9UHQ9 305 aa2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 MRM2Q9UI43 246 aaKnown RBP2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 NXT1Q9UKK6 140 aaKnown RBP2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 NEU3Q9UQ49 428 aa2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 PSG11Q9UQ72 335 aa2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 POFUT2Q9Y2G5 429 aa2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 LRP4O75096 1905 aa2.1□□□□□ -2.07
RNU6-840P-201ENST00000517275 ZNFX1Q9P2E3 1918 aaKnown RBP2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 TRAV19A0A0A6YYK7 116 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 CCL15-CCL14A0A0B4J2E2 113 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 A0A1B0GTI1 187 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 TVP23AA6NH52 213 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 ZNF705GA8MUZ8 300 aaPredicted RBP2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 H0YJW9 148 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 UPK1AO00322 258 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 CHST10O43529 356 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 SCN2BO60939 215 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 APCSP02743 223 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 MT-ND4P03905 459 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 IL12BP29460 328 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 PRSS3P35030 304 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 APLNRP35414 380 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 GALR1P47211 349 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 PPOXP50336 477 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR12D2P58182 307 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 DSTNP60981 165 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 TSPAN5P62079 268 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 MECOMQ03112 1051 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 LRRC63Q05C16 580 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 NAB1Q13506 487 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 RBMY1FQ15415 496 aaKnown RBP2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 CCL15Q16663 113 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 DEFB116Q30KQ4 102 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 C6orf99Q4VX62 202 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 MPV17L2Q567V2 206 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 RNASE13Q5GAN3 156 aaKnown RBP2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 TFDP3Q5H9I0 405 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 IDNKQ5T6J7 187 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 SYT6Q5T7P8 510 aaPredicted RBP2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 MFSD14CQ5VZR4 134 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 PDPK2PQ6A1A2 396 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 KDM4DQ6B0I6 523 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 Q6ZR03 302 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 SSX6Q7RTT6 188 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 COMTD1Q86VU5 262 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 WDFY1Q8IWB7 410 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 SPICQ8N5J4 248 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 DRAM1Q8N682 238 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 Q8N7P7 452 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 Q8N9L7 120 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 CDRT4Q8N9R6 151 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR4M1Q8NGD0 313 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR4K5Q8NGD3 323 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR1J4Q8NGS1 313 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR51Q1Q8NH59 317 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR5W2Q8NH69 310 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 UBA3Q8TBC4 463 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 SFXN5Q8TD22 340 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 FLYWCH2Q96CP2 140 aaKnown RBP2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 ZNF488Q96MN9 340 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 GABRG3Q99928 467 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 RSG1Q9BU20 258 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 CHCHD7Q9BUK0 85 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 SHCBP1LQ9BZQ2 653 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 ZDHHC4Q9NPG8 344 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 ACOT13Q9NPJ3 140 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 C8orf17Q9NRJ1 99 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 DDIT4Q9NX09 232 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 SDHAF2Q9NX18 166 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 RAB26Q9ULW5 256 aa2.09□□□□□ -2.07
RNU6-840P-201ENST00000517275 EIF4G1Q04637 1599 aaKnown RBP2.09□□□□□ -2.08
RNU6-840P-201ENST00000517275 ZNF646O15015 1829 aaPredicted RBP2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 IGKV6D-21A0A0A0MT36 114 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 FAM240AA0A1B0GVK7 77 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 J3QT63 122 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 MYL12BO14950 172 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 SNAI2O43623 268 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 BRI3O95415 125 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 C1GALT1C1LP0DN25 315 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 NQO2P16083 231 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 PGAM1P18669 254 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 MAGP20916 626 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 PSMB5P28074 263 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 GTF2H1P32780 548 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 MAP3K7CLP57077 242 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 KRTAP10-3P60369 221 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 IFFO1Q0D2I5 559 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 STX3Q13277 289 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 GUSBP1Q15486 140 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 SMUG1Q53HV7 270 aa2.08□□□□□ -2.08
RNU6-840P-201ENST00000517275 RESP18Q5W5W9 173 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms