RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 TCRBP04435 133 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 LPLP06858 475 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CHRM2P08172 466 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 HCKP08631 526 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 HOXD4P09016 255 aaPredicted RBP4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TRAPPC2P0DI81 140 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TRAPPC2BP0DI82 140 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CCL2P13500 99 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ZNF14P17017 642 aaPredicted RBP4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PRKACBP22694 351 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 HLA-DMAP28067 261 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PRSS3P35030 304 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TIMP3P35625 211 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 WNT5AP41221 380 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 RAG2P55895 527 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CD300CQ08708 224 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 FOXF2Q12947 444 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GK2Q14410 553 aaPredicted RBP4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GABRA6Q16445 453 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GSG1Q2KHT4 349 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 RNASE12Q5GAN4 147 aaKnown RBP4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 DMRTC1Q5HYR2 192 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TMEM255AQ5JRV8 349 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 AWAT2Q6E213 333 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ZNF585AQ6P3V2 769 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 VWA1Q6PCB0 445 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 BTN2A1Q7KYR7 527 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 MDP1Q86V88 176 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GCNT2Q8N0V5 402 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GABRG1Q8N1C3 465 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 WDR31Q8NA23 367 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 Q8NA96 180 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TMEM104Q8NE00 496 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 C1orf162Q8NEQ5 155 aaPredicted RBP4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 OR10R2Q8NGX6 335 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 FAM57AQ8TBR7 257 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 NANOS1Q8WY41 292 aaKnown RBP4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PIGTQ969N2 578 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 FAM46BQ96A09 425 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PHF21AQ96BD5 680 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 UPRTQ96BW1 309 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 WBP1Q96G27 269 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 MS4A3Q96HJ5 214 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TECTBQ96PL2 329 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TM2D1Q9BX74 207 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CACNG6Q9BXT2 260 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 LPAR5Q9H1C0 372 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 SCPEP1Q9HB40 452 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ZNF71Q9NQZ8 489 aaPredicted RBP4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TAS2R8Q9NYW2 309 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 COPZ2Q9P299 210 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ZNF107Q9UII5 783 aaPredicted RBP4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TP53TG5Q9Y2B4 290 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 STARD10Q9Y365 291 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 FAM215AQ9Y5M1 114 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 NUBP2Q9Y5Y2 271 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CHD8Q9HCK8 2581 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 DIDO1Q9BTC0 2240 aaKnown RBP4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ROS1P08922 2347 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ATRXP46100 2492 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CACNA1AO00555 2505 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 HMX3A6NHT5 357 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 FOXI3A8MTJ6 420 aaPredicted RBP4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 INMT-MINDY4F8WBC2 141 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 J3QW42 95 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 RAD51DO75771 328 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 LYZL6O75951 148 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 IGKV3-15P01624 115 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CD74P04233 296 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 HNRNPCP07910 306 aaKnown RBP eCLIP4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CSF1P09603 554 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CBR1P16152 277 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PSMB1P20618 241 aaKnown RBP4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GIFP27352 417 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CEACAM8P31997 349 aaPredicted RBP4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 APLNRP35414 380 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 VEGFCP49767 419 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 RBP2P50120 134 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TDGF1P3P51864 188 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 FUT6P51993 359 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 UCNP55089 124 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 MTCP1P56278 107 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TMEM50BP56557 158 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 RPS27AP62979 156 aaKnown RBP4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GUCA2AQ02747 115 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 HLXQ14774 488 aaPredicted RBP4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 P2RY6Q15077 328 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CNN3Q15417 329 aaKnown RBP4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 FAM189A2Q15884 450 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CARTPTQ16568 116 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TATDN3Q17R31 274 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 EIF2S3LQ2VIR3 472 aaKnown RBP4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 LINC00303Q3SY05 128 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CDNFQ49AH0 187 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 SLC22A6Q4U2R8 563 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PLAC9Q5JTB6 97 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 C1orf185Q5T7R7 199 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 RSBN1Q5VWQ0 802 aaPredicted RBP4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 FAM180AQ6UWF9 173 aa4.68□□□□□ -1.66
SCARNA20.4-201ENST00000516969 LHFPL2Q6ZUX7 228 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms