RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 PRSS3P35030 304 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 C6orf99Q4VX62 202 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 GCSAMLQ5JQS6 135 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 Q6ZQT7 251 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SLC16A14Q7RTX9 510 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 RPRMLQ8N4K4 120 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 BPIFB6Q8NFQ5 453 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OR8K1Q8NGG5 319 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 KCNG3Q8TAE7 436 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SFXN5Q8TD22 340 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CAPSLQ8WWF8 208 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 ITLN2Q8WWU7 325 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 ALS2CR12Q96Q35 445 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TRIB3Q96RU7 358 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 MRPL16Q9NX20 251 aaKnown RBP0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 MPDZO75970 2070 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CCL15-CCL14A0A0B4J2E2 113 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TMEM72A0PK05 275 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 ZNF860A6NHJ4 632 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 GABRPO00591 440 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 PSPHP1O15172 72 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 NCF2P19878 526 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 IL3RAP26951 378 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OR1E1P30953 314 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 MAGEA6P43360 314 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 PPICP45877 212 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 RPS15AP62244 130 aaKnown RBP0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 UBE2HP62256 183 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 IL24Q13007 206 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 GPM6BQ13491 265 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CCL15Q16663 113 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SLC8B1Q6J4K2 584 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TMEM144Q7Z5S9 345 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 NAA40Q86UY6 237 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 HORMAD1Q86X24 394 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 NECAB1Q8N987 351 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OR56B2PQ8NGI1 322 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OR5K2Q8NHB8 316 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 LYPD6BQ8NI32 183 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 GPR119Q8TDV5 335 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 BLNKQ8WV28 456 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 MRPL48Q96GC5 212 aaKnown RBP0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 PRRC1Q96M27 445 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 DERL3Q96Q80 235 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CENPKQ9BS16 269 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TMEM38AQ9H6F2 299 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 ADAMTS7Q9UKP4 1686 aa0.55□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SMCO3A2RU48 225 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 LY6LH3BQJ8 138 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 M0R3G1 203 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SPAG6O75602 509 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 PGA4P0DJD7 388 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 PGA3P0DJD8 388 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CGB3P0DN86 165 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SLC2A3P11169 496 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 MYCNOSP40205 109 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TUFMP49411 452 aaKnown RBP0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 BST1Q10588 318 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 HADHQ16836 314 aaKnown RBP0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 KLHL40Q2TBA0 621 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 HSP90AB3PQ58FF7 597 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 C22orf42Q6IC83 251 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 EIF1ADQ8N9N8 165 aaKnown RBP0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OR4A4PQ8NGN8 299 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OR8J1Q8NGP2 316 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TTTY12Q9BZ98 90 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CA10Q9NS85 328 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 RBFOX1Q9NWB1 397 aaKnown RBP0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CCDC88CQ9P219 2028 aa0.54□□□□□ -2.32
RNU6-1088P-201ENST00000516850 A0A0B4J2C4 111 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 NME4O00746 187 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 MYL12BO14950 172 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CRTAPO75718 401 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OR2J3O76001 311 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CXorf1O96002 111 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 RAB4AP20338 218 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 GBX2P52951 348 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 RAB10P61026 200 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SSX2Q16385 188 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 N4BP2L1Q5TBK1 243 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 ZYG11AQ6WRX3 759 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 C3orf22Q8N5N4 141 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OR7G2Q8NG99 324 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OR10W1Q8NGF6 305 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OR1S1Q8NH92 325 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SGTBQ96EQ0 304 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 ZBTB18Q99592 522 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 KIR3DX1Q9H7L2 352 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 HYPKQ9NX55 129 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SLC17A4Q9Y2C5 497 aa0.53□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OTOFQ9HC10 1997 aa0.52□□□□□ -2.33
RNU6-1088P-201ENST00000516850 SLC16A7O60669 478 aa0.52□□□□□ -2.33
RNU6-1088P-201ENST00000516850 PTHP01270 115 aa0.52□□□□□ -2.33
RNU6-1088P-201ENST00000516850 HBE1P02100 147 aa0.52□□□□□ -2.33
RNU6-1088P-201ENST00000516850 CDK1P06493 297 aa0.52□□□□□ -2.33
RNU6-1088P-201ENST00000516850 SEC11BP0C7V7 166 aa0.52□□□□□ -2.33
RNU6-1088P-201ENST00000516850 PTHLHP12272 177 aa0.52□□□□□ -2.33
RNU6-1088P-201ENST00000516850 FABP6P51161 128 aa0.52□□□□□ -2.33
RNU6-1088P-201ENST00000516850 ENDOGQ14249 297 aaKnown RBP0.52□□□□□ -2.33
RNU6-1088P-201ENST00000516850 TMEM236Q5W0B7 351 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms