RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 SH3GL3Q99963 347 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 KCNS3Q9BQ31 491 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 COPS4Q9BT78 406 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 ABHD6Q9BV23 337 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 MROQ9BYG7 248 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 ZNF696Q9H7X3 374 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 RNF121Q9H920 327 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 ELOVL3Q9HB03 270 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 CDH20Q9HBT6 801 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 ABCB9Q9NP78 766 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 TRIM36Q9NQ86 728 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 RASSF1Q9NS23 344 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 LIN7CQ9NUP9 197 aaKnown RBP1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 FAM206AQ9NX38 181 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 SCN3BQ9NY72 215 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 UBAP1Q9NZ09 502 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 NPAP1Q9NZP6 1156 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PLEKHB1Q9UF11 243 aaPredicted RBP1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 NUFIP1Q9UHK0 495 aaKnown RBP1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 MRM2Q9UI43 246 aaKnown RBP1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 LAMP5Q9UJQ1 280 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 COPS3Q9UNS2 423 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 CAB39Q9Y376 341 aaPredicted RBP1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 NOP16Q9Y3C1 178 aaKnown RBP1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 RNF115Q9Y4L5 304 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 LRP12Q9Y561 859 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 R4GMQ9 66 aa1.88□□□□□ -2.11
SCARNA16.3-201ENST00000516595 USP9YO00507 2555 aaPredicted RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 A0A087WXM4 84 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 TRBV5-5A0A0J9YX44 114 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 hCG_38984A0A1B0GV85 526 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 TMEM269A0A1B0GVZ9 245 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 A0A1W2PPR1 153 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 DAPL1A0PJW8 107 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 C5orf49A4QMS7 147 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 TMEM212A6NML5 194 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 OR4C45A6NMZ5 311 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 IQCF6A8MYZ5 107 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 B9A039 149 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 ATP6V1G2-DDX39BF2Z307 99 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 LOC110117498-PIK3R3F6TDL0 507 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 H7C417 338 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 M0R1B8 84 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 ABCD4O14678 606 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 HS3ST1O14792 307 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 OGG1O15527 345 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PLPP2O43688 288 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 XPNPEP2O43895 674 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 GPRIN2O60269 458 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 MTRF1O75570 445 aaKnown RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 CTAG2O75638 210 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 SC5DO75845 299 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 DHRS3O75911 302 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PTBP3O95758 552 aaKnown RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 IGHV3-13P01766 116 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 TTRP02766 147 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 MT-ND2P03891 347 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 RAF1P04049 648 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 HTR1AP08908 422 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 MRPL3P09001 348 aaKnown RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 H2BFMP0C1H6 154 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 DANCRP0C864 163 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PATE4P0C8F1 98 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 ZNF250P15622 560 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PAX1P15863 534 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 SELEP16581 610 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 ZNF12P17014 697 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 KITLGP21583 273 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PCMT1P22061 227 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 GALP22466 123 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PSMA1P25786 263 aaKnown RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 STOMP27105 288 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 MAPK3P27361 379 aaPredicted RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 HSD11B1P28845 292 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 C21orf33P30042 268 aaPredicted RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 CALCRP30988 508 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 TTKP33981 857 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 WNT5AP41221 380 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 RPS27P42677 84 aaKnown RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PCP4P48539 62 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PTH2RP49190 550 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 CX3CR1P49238 355 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PPOXP50336 477 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 ZNF83P51522 516 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PRKXP51817 358 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 GBX2P52951 348 aaPredicted RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 UCP2P55851 309 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 KLF3P57682 345 aaPredicted RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 ZNF121P58317 390 aaPredicted RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 SELENOVP59797 346 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PPP1CBP62140 327 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 TUBA1BP68363 451 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 MRPS11P82912 194 aaKnown RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 GALK2Q01415 458 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 ST3GAL4Q11206 333 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 PTPN13Q12923 2485 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 MLLT11Q13015 90 aaPredicted RBP1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 GPR50Q13585 617 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 TPBGQ13641 420 aa1.87□□□□□ -2.11
SCARNA16.3-201ENST00000516595 ALKBH1Q13686 389 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms