RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 A0A1B0GW15 77 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 MGAT4DA6NG13 374 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 H0Y9J4 135 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 H3BNH8 94 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 TNFSF11O14788 317 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 RAD51BO15315 384 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 HDAC3O15379 428 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 NIPSNAP2O75323 286 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 ALOX12BO75342 701 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 SC5DO75845 299 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 SRP72O76094 671 aaKnown RBP2.22□□□□□ -2.05
HERC4-215ENST00000515753 CCNE2O96020 404 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 S100A6P06703 90 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 RETP07949 1114 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 CSF3P09919 207 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 OR8U9P0C7N5 309 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 CCDC166P0CW27 439 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 IGKV1-13P0DP09 117 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 COX7A1P24310 79 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 LOXP28300 417 aaPredicted RBP2.22□□□□□ -2.05
HERC4-215ENST00000515753 MAS1LP35410 378 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 DRD3P35462 400 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 CSNK1A1P48729 337 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 FABP6P51161 128 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 P2RY4P51582 365 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 ZNF121P58317 390 aaPredicted RBP2.22□□□□□ -2.05
HERC4-215ENST00000515753 NUTF2P61970 127 aaKnown RBP2.22□□□□□ -2.05
HERC4-215ENST00000515753 VSNL1P62760 191 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 SEMG2Q02383 582 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 ITGB3BPQ13352 177 aaPredicted RBP2.22□□□□□ -2.05
HERC4-215ENST00000515753 AQP6Q13520 282 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 CAPRIN1Q14444 709 aaKnown RBP2.22□□□□□ -2.05
HERC4-215ENST00000515753 KIAA0087Q14695 138 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 QPRTQ15274 297 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 TNXAQ16473 311 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 CLLU1OSQ5K130 101 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 CASC10Q5T4H9 136 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 CCNJQ5T5M9 372 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 ANKRD22Q5VYY1 191 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 NPSR1Q6W5P4 371 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 BHLHA15Q7RTS1 189 aaPredicted RBP2.22□□□□□ -2.05
HERC4-215ENST00000515753 FAM220AQ7Z4H9 259 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 ABHD12BQ7Z5M8 362 aaPredicted RBP2.22□□□□□ -2.05
HERC4-215ENST00000515753 OR4F15Q8NGB8 312 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 OR10G9Q8NGN4 311 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 OR8U1Q8NH10 309 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 APH1BQ8WW43 257 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 UCN3Q969E3 161 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 CLDN23Q96B33 292 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 RCN3Q96D15 328 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 MBOAT7Q96N66 472 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 NICN1Q9BSH3 213 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 BBS2Q9BXC9 721 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 ANGPTL4Q9BY76 406 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 RPF2Q9H7B2 306 aaKnown RBP2.22□□□□□ -2.05
HERC4-215ENST00000515753 KCNJ16Q9NPI9 418 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 NECAP2Q9NVZ3 263 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 RMND1Q9NWS8 449 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 SLC39A1Q9NY26 324 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 VAPAQ9P0L0 249 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 CLEC4EQ9ULY5 219 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 MOKQ9UQ07 419 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 POFUT2Q9Y2G5 429 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 FADS3Q9Y5Q0 445 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 AK9Q5TCS8 1911 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 CLUHO75153 1309 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 KIR2DL5BA0A0G2JN68 375 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 KIR2DL5BA0A0G2JPC4 375 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 A0A1B0GTI1 187 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 ANKRD20A5PA0PJZ0 165 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 NCBP2LA6PVI3 153 aaKnown RBP2.21□□□□□ -2.06
HERC4-215ENST00000515753 SEC14L6B5MCN3 397 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 F8VP50 259 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 H7C2Y5 167 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 UTS2O95399 124 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 DEXIO95424 95 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 OXTP01178 125 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 SMIM10L1P0DMW3 83 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 ICAM2P13598 275 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 CSNK2A2P19784 350 aaPredicted RBP2.21□□□□□ -2.06
HERC4-215ENST00000515753 CCNE1P24864 410 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 HOXA6P31267 233 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 HRH1P35367 487 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 CXCL12P48061 93 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 CSNK1DP48730 415 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 UBE2IP63279 158 aaKnown RBP2.21□□□□□ -2.06
HERC4-215ENST00000515753 ST3GAL4Q11206 333 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 HTR4Q13639 388 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 PRPSAP1Q14558 356 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 UBE2SQ16763 222 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 COA6Q5JTJ3 125 aaKnown RBP2.21□□□□□ -2.06
HERC4-215ENST00000515753 C9orf129Q5T035 196 aaKnown RBP2.21□□□□□ -2.06
HERC4-215ENST00000515753 CPTPQ5TA50 214 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 DUPD1Q68J44 220 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 FAHD1Q6P587 224 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 CD300LGQ6UXG3 332 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 SSX6Q7RTT6 188 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 ZBTB8OSQ8IWT0 167 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 SELENOHQ8IZQ5 122 aaKnown RBP2.21□□□□□ -2.06
HERC4-215ENST00000515753 KIR2DL5AQ8N109 375 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms