RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TMEM14AQ9Y6G1 99 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 DOCK11Q5JSL3 2073 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 IGHV2-70DA0A0C4DH43 119 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 ANXA2P2A6NMY6 339 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 A8MXK9 166 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 P2RY10O00398 339 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 TNFRSF13BO14836 293 aaPredicted RBP9.56□□□□□ -0.88
VCAN-212ENST00000515397 AKR7A2O43488 359 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 ENTPD6O75354 484 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 SRSF10O75494 262 aaKnown RBP9.56□□□□□ -0.88
VCAN-212ENST00000515397 BAG2O95816 211 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 TTRP02766 147 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 IGHV4-38-2P0DP08 117 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 FAHP16930 419 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 GATA3P23771 443 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 HTR1FP30939 366 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 ATP6V1E1P36543 226 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 PSMB10P40306 273 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 PAX8Q06710 450 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 DEGS2Q6QHC5 323 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 DCDC5Q6ZRR9 648 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 NLRC3Q7RTR2 1065 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 GID4Q8IVV7 300 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 BATF2Q8N1L9 274 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 GALNT4Q8N4A0 578 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.56□□□□□ -0.88
VCAN-212ENST00000515397 YIPF7Q8N8F6 280 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 PLPP7Q8NBV4 271 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 SCCPDHQ8NBX0 429 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 HPSE2Q8WWQ2 592 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 MBOAT4Q96T53 435 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 NUDT16L1Q9BRJ7 211 aaKnown RBP9.56□□□□□ -0.88
VCAN-212ENST00000515397 S100A14Q9HCY8 104 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 OR52A1Q9UKL2 312 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 PIGLQ9Y2B2 252 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 LRCH1Q9Y2L9 728 aa9.56□□□□□ -0.88
VCAN-212ENST00000515397 POLR3KQ9Y2Y1 108 aaPredicted RBP9.56□□□□□ -0.88
VCAN-212ENST00000515397 FBN3Q75N90 2809 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 TRAV38-1A0A0B4J264 116 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 PPIAL4CA0A0B4J2A2 164 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 KIR2DS1A0A191URI9 304 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 A0A1B0GTI1 187 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 ZNF732B4DXR9 585 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 LOC110117498-PIK3R3F6TDL0 507 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.55□□□□□ -0.88
VCAN-212ENST00000515397 ZNF254O75437 659 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 RHBDL1O75783 438 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 CST4P01036 141 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 FSHBP01225 129 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 SELLP14151 372 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 AMY2BP19961 511 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 MAP2K3P46734 347 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 FGF12P61328 243 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 IL5RAQ01344 420 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 PRB3Q04118 309 aaPredicted RBP9.55□□□□□ -0.88
VCAN-212ENST00000515397 MZT1Q08AG7 82 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 ZNF829Q3KNS6 432 aaPredicted RBP9.55□□□□□ -0.88
VCAN-212ENST00000515397 ARMCX4Q5H9R4 360 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 WDR38Q5JTN6 314 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 ZFP1Q6P2D0 407 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 BTNL3Q6UXE8 466 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 THAP5Q7Z6K1 395 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 ZDHHC23Q8IYP9 409 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 BPIFB2Q8N4F0 458 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 OR8J1Q8NGP2 316 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 ZNF418Q8TF45 676 aaPredicted RBP9.55□□□□□ -0.88
VCAN-212ENST00000515397 HIST1H2AAQ96QV6 131 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 MRI1Q9BV20 369 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 RTL8AQ9BWD3 113 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 ESM1Q9NQ30 184 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 GPR173Q9NS66 373 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 IMPAD1Q9NX62 359 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 HAO2Q9NYQ3 351 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 ERVK-18Q9QC07 812 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 WARS2Q9UGM6 360 aaKnown RBP9.55□□□□□ -0.88
VCAN-212ENST00000515397 NUFIP1Q9UHK0 495 aaKnown RBP9.55□□□□□ -0.88
VCAN-212ENST00000515397 ENOPH1Q9UHY7 261 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 ORC6Q9Y5N6 252 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 MPC1Q9Y5U8 109 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 R4GMQ9 66 aa9.55□□□□□ -0.88
VCAN-212ENST00000515397 A0A0U1RQV5 110 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 ZNF816-ZNF321PA0A0X1KG74 233 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 ACOD1A6NK06 481 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 ANKRD65E5RJM6 399 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 DVL1O14640 695 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 TMPRSS2O15393 492 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 SFTPBP07988 381 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 ALDH3A2P51648 485 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 CDC42P60953 191 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 ZNF85Q03923 595 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 RIPPLY1Q0D2K3 151 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 IKZF1Q13422 519 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 TP53I3Q53FA7 332 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 BCL2L15Q5TBC7 163 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 PLCXD3Q63HM9 321 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 ELMOD2Q8IZ81 293 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 RDH10Q8IZV5 341 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 FAM216BQ8N7L0 139 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 SIGLECL1Q8N7X8 197 aa9.54□□□□□ -0.88
VCAN-212ENST00000515397 SEMA6DQ8NFY4 1073 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms