RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 A0A1B0GVI7 797 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 IRGMA1A4Y4 181 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 A6NIN4 97 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 FAM157AC9JC47 383 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 XPNPEP2O43895 674 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 TGFAP01135 160 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 LIMS3P0CW19 117 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 LIMS4P0CW20 117 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 ZNF16P17020 682 aaPredicted RBP11.73□□□□□ -0.53
USP46-209ENST00000514536 DCKP27707 260 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 ETV1P50549 477 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 NANOS3P60323 173 aaKnown RBP11.73□□□□□ -0.53
USP46-209ENST00000514536 BTG1P62324 171 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 ZMYND11Q15326 602 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 CEP78Q5JTW2 689 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 FDX2Q6P4F2 183 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 MOB3CQ70IA8 216 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 KRT74Q7RTS7 529 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 WDR86Q86TI4 376 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 ZDHHC23Q8IYP9 409 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 C1orf87Q8N0U7 546 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 SYS1Q8N2H4 156 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 BOLLQ8N9W6 283 aaKnown RBP11.73□□□□□ -0.53
USP46-209ENST00000514536 BPIFB6Q8NFQ5 453 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 RTL8AQ9BWD3 113 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 ZNF665Q9H7R5 613 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 ABCB9Q9NP78 766 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 RNF7Q9UBF6 113 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 PCDHB10Q9UN67 800 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 V9GYS6 101 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 NAV3Q8IVL0 2385 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 SYT7O43581 403 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 NRASP01111 189 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 CCL1P22362 96 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 THBS2P35442 1172 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 HOXA4Q00056 320 aaPredicted RBP11.72□□□□□ -0.53
USP46-209ENST00000514536 ZBTB37Q5TC79 503 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 IZUMO2Q6UXV1 221 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 Q6ZSR3 168 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 KCTD8Q6ZWB6 473 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 C11orf53Q8IXP5 236 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 LINC01356Q8N9X3 169 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 C19orf18Q8NEA5 215 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 HPSE2Q8WWQ2 592 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 C1orf159Q96HA4 380 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 TMEM80Q96HE8 168 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 JAM3Q9BX67 310 aa11.72□□□□□ -0.53
USP46-209ENST00000514536 FGF23Q9GZV9 251 aaPredicted RBP11.72□□□□□ -0.53
USP46-209ENST00000514536 DIMT1Q9UNQ2 313 aaKnown RBP11.72□□□□□ -0.53
USP46-209ENST00000514536 PPIAL4EA0A075B759 164 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 hCG_1807616A0A1W2PRN6 198 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 A8MV72 311 aaPredicted RBP11.71□□□□□ -0.53
USP46-209ENST00000514536 INAFM1C9JVW0 142 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 E9PI62 339 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 PPIAL4DF5H284 164 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 LMX1BO60663 402 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 IGHV2-5P01817 119 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 PPIAL4FP0DN26 164 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 MDH2P40926 338 aaKnown RBP11.71□□□□□ -0.53
USP46-209ENST00000514536 CCR9P51686 369 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 CDH15P55291 814 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 CSNK2BP67870 215 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 ST3GAL4Q11206 333 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 ZNF154Q13106 437 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 ALKBH1Q13686 389 aaKnown RBP11.71□□□□□ -0.53
USP46-209ENST00000514536 TMEM155Q4W5P6 130 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 TMEM244Q5VVB8 128 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 EGFL6Q8IUX8 553 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 DEFB108BQ8NET1 73 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 RAB39BQ96DA2 213 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 METTL17Q9H7H0 456 aaPredicted RBP11.71□□□□□ -0.53
USP46-209ENST00000514536 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 TMEM165Q9HC07 324 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 GPR173Q9NS66 373 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 PLCXD1Q9NUJ7 323 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 CLEC2DQ9UHP7 191 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 PSORS1C1Q9UIG5 152 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 EXOSC1Q9Y3B2 195 aaKnown RBP11.71□□□□□ -0.53
USP46-209ENST00000514536 RRP15Q9Y3B9 282 aaKnown RBP11.71□□□□□ -0.53
USP46-209ENST00000514536 PPIAL4AQ9Y536 164 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 ZANQ9Y493 2812 aa11.71□□□□□ -0.53
USP46-209ENST00000514536 LOC107986453A0A1B0GWG9 222 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 EFCAB10A6NFE3 127 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 B4DSR2 109 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 ZNF732B4DXR9 585 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 CDIPTO14735 213 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 UBCP0CG48 685 aaKnown RBP11.71□□□□□ -0.54
USP46-209ENST00000514536 MYL12AP19105 171 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 GPM6AP51674 278 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 GBX2P52951 348 aaPredicted RBP11.71□□□□□ -0.54
USP46-209ENST00000514536 CEACAM21Q3KPI0 293 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 CLVS2Q5SYC1 327 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 C6orf141Q5SZD1 244 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 OR2G6Q5TZ20 316 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 PLCXD3Q63HM9 321 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 SFRP4Q6FHJ7 346 aaPredicted RBP11.71□□□□□ -0.54
USP46-209ENST00000514536 FAM166AQ6J272 317 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 TMPRSS11AQ6ZMR5 421 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 KLHL36Q8N4N3 616 aa11.71□□□□□ -0.54
USP46-209ENST00000514536 SPICQ8N5J4 248 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms