RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 DECR2Q9NUI1 292 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 UFSP2Q9NUQ7 469 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 MRPL15Q9P015 296 aaKnown RBP8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 BLOC1S6Q9UL45 172 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 ERGIC3Q9Y282 383 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 LSM2Q9Y333 95 aaKnown RBP8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 V9GYS6 101 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 ZNF469Q96JG9 3925 aaPredicted RBP8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 ITPR3Q14573 2671 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 IGHV1-69-2A0A0G2JMI3 117 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 ZNF816-ZNF321PA0A0X1KG74 233 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 RP2O75695 350 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 CYB5R3P00387 301 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 GRPP07492 148 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 CD55P08174 381 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 HSMCR30P0CW71 290 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 TNFSF4P23510 183 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 THBS2P35442 1172 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 LIPAP38571 399 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 DDOSTP39656 456 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 TGM4P49221 684 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 CCR9P51686 369 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 GABARAPL2P60520 117 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 RIPPLY1Q0D2K3 151 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 MAB21L1Q13394 359 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 TESK1Q15569 626 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 MPPED2Q15777 294 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 FAM209AQ5JX71 171 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 AVPI1Q5T686 147 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 PLCXD3Q63HM9 321 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 CLEC2AQ6UVW9 174 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 ZNF826PQ6ZT77 177 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 KCTD8Q6ZWB6 473 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 MOB3CQ70IA8 216 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 PRSS48Q7RTY5 328 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 ZDHHC23Q8IYP9 409 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 C19orf18Q8NEA5 215 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 CSNK2A3Q8NEV1 391 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 OR13C3Q8NGS6 347 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 OR8S1Q8NH09 359 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 OR5AK2Q8NH90 309 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 TRMT10AQ8TBZ6 339 aaKnown RBP8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 RPS4Y2Q8TD47 263 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 ORAI1Q96D31 301 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 SMIM19Q96E16 107 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 CDCA4Q9BXL8 241 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 COMMD4Q9H0A8 199 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 ZNF275Q9NSD4 429 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 BABAM2Q9NXR7 383 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 ENPP5Q9UJA9 477 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 ZNF391Q9UJN7 358 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 ZDHHC8Q9ULC8 765 aa8.29□□□□□ -1.08
TOPBP1-209ENST00000513818 LOC100289279A0A1B0GTE1 492 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 A0A1B0GWJ7 208 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 ANKRD61A6NGH8 418 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 A6NLC8 198 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 TMEM212A6NML5 194 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 OGG1O15527 345 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 MTRF1O75570 445 aaKnown RBP8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 ZNF205O95201 554 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 CST4P01036 141 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 ADH4P08319 380 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 CELP19835 753 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 PMELP40967 661 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 PDLIM4P50479 330 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 MRPL28Q13084 256 aaKnown RBP8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 INSL4Q14641 139 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 FAM201AQ5SY85 155 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 TMEM244Q5VVB8 128 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 DMKNQ6E0U4 476 aaPredicted RBP8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 RPL22L1Q6P5R6 122 aaKnown RBP8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 DNM1P46Q6ZS02 220 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 BATF2Q8N1L9 274 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 CIARTQ8N365 385 aaPredicted RBP8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 C10orf105Q8TEF2 133 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 FAM168AQ92567 244 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 CCL17Q92583 94 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 RDH5Q92781 318 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 RPL3LQ92901 407 aaKnown RBP8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 FGGYQ96C11 551 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 ITPKCQ96DU7 683 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 PGLYRP3Q96LB9 341 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 DIRC2Q96SL1 478 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 MYCBPQ99417 103 aaPredicted RBP8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 NKX3-1Q99801 234 aaPredicted RBP8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 BPESC1Q9GZL8 116 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 EGLN1Q9GZT9 426 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 NKIRAS2Q9NYR9 191 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 IL19Q9UHD0 177 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 HHLA2Q9UM44 414 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 DHDHQ9UQ10 334 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 DYSFO75923 2080 aa8.28□□□□□ -1.08
TOPBP1-209ENST00000513818 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 A0A1W2PPK0 400 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 LOC390937A0A1W2PQ73 354 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 hCG_1807616A0A1W2PRN6 198 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 ANXA2P2A6NMY6 339 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 ZNF732B4DXR9 585 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 H7C1Q1 480 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 LCE2BO14633 110 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms