RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 LHFPL2Q6ZUX7 228 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 TMEM229BQ8NBD8 167 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 STEAP2Q8NFT2 490 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 OR56B4Q8NH76 319 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 MBD3L2Q8NHZ7 208 aaPredicted RBP7.26□□□□□ -1.25
RNF4-220ENST00000513578 UBASH3BQ8TF42 649 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 GPR137Q96N19 417 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 TRIB1Q96RU8 372 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 URM1Q9BTM9 101 aaKnown RBP7.26□□□□□ -1.25
RNF4-220ENST00000513578 REPIN1Q9BWE0 567 aaKnown RBP7.26□□□□□ -1.25
RNF4-220ENST00000513578 SCNM1Q9BWG6 230 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 TM2D1Q9BX74 207 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 CST11Q9H112 138 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 LPAR5Q9H1C0 372 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 NOX3Q9HBY0 568 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 KLK11Q9UBX7 282 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 LHX6Q9UPM6 363 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 BOLA1Q9Y3E2 137 aa7.26□□□□□ -1.25
RNF4-220ENST00000513578 A0A096LPE4 126 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 A0A1W2PPZ6 126 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 ZNF503-AS2A6NEH8 195 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 WIPF3A6NGB9 483 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 K7ENP7 123 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 GMDSO60547 372 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 CDC14BO60729 498 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 PRAF2O60831 178 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 ZNF780AO75290 641 aaPredicted RBP7.25□□□□□ -1.25
RNF4-220ENST00000513578 CST4P01036 141 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 PDGFAP04085 211 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 CD74P04233 296 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 AKAIN1P0CW23 69 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 PSMB1P20618 241 aaKnown RBP7.25□□□□□ -1.25
RNF4-220ENST00000513578 IGHV1-2P23083 117 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 TUBG1P23258 451 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 MPZP25189 248 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 GIFP27352 417 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 OR3A4PP47883 348 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 FUT6P51993 359 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 RAB25P57735 213 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 TAS2R19P59542 299 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 RPS27AP62979 156 aaKnown RBP7.25□□□□□ -1.25
RNF4-220ENST00000513578 ZNF92Q03936 586 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 MALLQ13021 153 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 PPA1Q15181 289 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 GABRA6Q16445 453 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 TATDN3Q17R31 274 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 GSG1Q2KHT4 349 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 ZNF324BQ6AW86 544 aaPredicted RBP7.25□□□□□ -1.25
RNF4-220ENST00000513578 OR10K2Q6IF99 312 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 INO80CQ6PI98 192 aaPredicted RBP7.25□□□□□ -1.25
RNF4-220ENST00000513578 ZNF584Q8IVC4 421 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 SPACA3Q8IXA5 215 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 GABRG1Q8N1C3 465 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 C17orf78Q8N4C9 275 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 FAM169BQ8N8A8 192 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 C9orf106Q8NAJ2 232 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 CSNK2A3Q8NEV1 391 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 PXT1Q8NFP0 134 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 OR56B1Q8NGI3 324 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 OR10R2Q8NGX6 335 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 OR6F1Q8NGZ6 308 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 OR2AE1Q8NHA4 323 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 HPS1Q92902 700 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 MED30Q96HR3 178 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 GPER1Q99527 375 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 TRAF4Q9BUZ4 470 aaPredicted RBP7.25□□□□□ -1.25
RNF4-220ENST00000513578 KCNK15Q9H427 330 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 C12orf49Q9H741 205 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 OBP2BQ9NPH6 170 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 TUBG2Q9NRH3 451 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 IL36GQ9NZH8 169 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 KCNN3Q9UGI6 736 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 ANAPC10Q9UM13 185 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 ALG5Q9Y673 324 aa7.25□□□□□ -1.25
RNF4-220ENST00000513578 HELZ2Q9BYK8 2649 aaKnown RBP7.24□□□□□ -1.25
RNF4-220ENST00000513578 BOLA2-SMG1P6H3BVE0 249 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 AKR7A2O43488 359 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 CCNKO75909 580 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 WISP2O76076 250 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 NDUFB6O95139 128 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 NRASP01111 189 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 CGAP01215 116 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 H2AFB2P0C5Z0 115 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 CD79AP11912 226 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 ZNF14P17017 642 aaPredicted RBP7.24□□□□□ -1.25
RNF4-220ENST00000513578 NAT1P18440 290 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 TBPP20226 339 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 RCVRNP35243 200 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 APLNRP35414 380 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 TIMP3P35625 211 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 RBP2P50120 134 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 ATP1B3P54709 279 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 UCNP55089 124 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 ZMYND11Q15326 602 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 PCGF3Q3KNV8 242 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 MOGAT2Q3SYC2 334 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 PLEKHN1Q494U1 663 aaPredicted RBP7.24□□□□□ -1.25
RNF4-220ENST00000513578 RNASE12Q5GAN4 147 aaKnown RBP7.24□□□□□ -1.25
RNF4-220ENST00000513578 C9orf135Q5VTT2 229 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 RTL6Q6ICC9 239 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms