RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.72□□□□□ -0.21
DDX41-213ENST00000512027 TNFRSF13BO14836 293 aaPredicted RBP13.72□□□□□ -0.21
DDX41-213ENST00000512027 ZNF254O75437 659 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 CST4P01036 141 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 LHBP01229 141 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 TTRP02766 147 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 TFF1P04155 84 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 FAHP16930 419 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 HTR1FP30939 366 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 ZNF829Q3KNS6 432 aaPredicted RBP13.72□□□□□ -0.21
DDX41-213ENST00000512027 CEP78Q5JTW2 689 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 ZFP1Q6P2D0 407 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 ZDHHC23Q8IYP9 409 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 CBR4Q8N4T8 237 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.72□□□□□ -0.21
DDX41-213ENST00000512027 OR8J1Q8NGP2 316 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 OR5P3Q8WZ94 311 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 MICU1Q9BPX6 476 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 MRI1Q9BV20 369 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 RTL8AQ9BWD3 113 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 HAO2Q9NYQ3 351 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 WARS2Q9UGM6 360 aaKnown RBP13.72□□□□□ -0.21
DDX41-213ENST00000512027 NUFIP1Q9UHK0 495 aaKnown RBP13.72□□□□□ -0.21
DDX41-213ENST00000512027 MPC1Q9Y5U8 109 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 TRAV38-1A0A0B4J264 116 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 A0A0U1RQV5 110 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 A0A1W2PQL4 384 aaPredicted RBP13.71□□□□□ -0.21
DDX41-213ENST00000512027 LOC110117498-PIK3R3F6TDL0 507 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 H3BSH0 61 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 PHYHO14832 338 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 RPP14O95059 124 aaKnown RBP13.71□□□□□ -0.21
DDX41-213ENST00000512027 IGLV3-1P01715 115 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 DCTDP32321 178 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 MAP2K3P46734 347 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 ALDH3A2P51648 485 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 GPM6AP51674 278 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 CDC42P60953 191 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 IL5RAQ01344 420 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 PAX8Q06710 450 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 ODF4Q2M2E3 257 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 TEX36Q5VZQ5 186 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 BCL6BQ8N143 479 aaPredicted RBP13.71□□□□□ -0.21
DDX41-213ENST00000512027 GALNT4Q8N4A0 578 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 FTMTQ8N4E7 242 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 TEX29Q8N6K0 151 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 ZNF418Q8TF45 676 aaPredicted RBP13.71□□□□□ -0.21
DDX41-213ENST00000512027 RAB40AQ8WXH6 277 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 RNF170Q96K19 258 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 MBOAT4Q96T53 435 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 NUDT16L1Q9BRJ7 211 aaKnown RBP13.71□□□□□ -0.21
DDX41-213ENST00000512027 TLNRD1Q9H1K6 362 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 WDR13Q9H1Z4 485 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 S100A14Q9HCY8 104 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 USE1Q9NZ43 259 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 ZNF69Q9UC07 566 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 ZNF391Q9UJN7 358 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 SLC22A13Q9Y226 551 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 SOX21Q9Y651 276 aaPredicted RBP13.71□□□□□ -0.21
DDX41-213ENST00000512027 R4GMQ9 66 aa13.71□□□□□ -0.21
DDX41-213ENST00000512027 ZNF816-ZNF321PA0A0X1KG74 233 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 A6NIN4 97 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 ACOD1A6NK06 481 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 P2RY10O00398 339 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 AKR7A2O43488 359 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 IGHV4-38-2P0DP08 117 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 BCL2L15Q5TBC7 163 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 BTNL3Q6UXE8 466 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 BPIFB2Q8N4F0 458 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 YIPF7Q8N8F6 280 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 SCCPDHQ8NBX0 429 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 OR10H4Q8NGA5 316 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 OR5T2Q8NGG2 359 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 MNTQ99583 582 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 CCL13Q99616 98 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 SLC29A1Q99808 456 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 RNPEPL1Q9HAU8 725 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 ESM1Q9NQ30 184 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 SNTG1Q9NSN8 517 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 IMPAD1Q9NX62 359 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 ERVK-18Q9QC07 812 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 OR52A1Q9UKL2 312 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 PIGLQ9Y2B2 252 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 ORC6Q9Y5N6 252 aa13.7□□□□□ -0.22
DDX41-213ENST00000512027 TRAV40A0A0B4J280 105 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 A0A1B0GTI1 187 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 SRRM5B3KS81 715 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 ENTPD6O75354 484 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 RHBDL1O75783 438 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 HILS1P60008 231 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 EGR3Q06889 387 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 SCGB2A2Q13296 93 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 KCNJ8Q15842 424 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 SNCBQ16143 134 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 WDR38Q5JTN6 314 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 MOB3CQ70IA8 216 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 THAP5Q7Z6K1 395 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 FAM216BQ8N7L0 139 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 HRASLS5Q96KN8 279 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 NUP50Q9UKX7 468 aa13.69□□□□□ -0.22
DDX41-213ENST00000512027 KIR2DS1A0A191URI9 304 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms