RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 GGT3PA6NGU5 568 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 VGLL3A8MV65 326 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 F2RL2O00254 374 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 BHLHE40O14503 412 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 FFAR1O14842 300 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 ANGPTL7O43827 346 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 ALDOBP05062 364 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 GGT2P36268 569 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 SPIBQ01892 262 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 PRKCDQ05655 676 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 PPP1R8Q12972 351 aaKnown RBP9.35□□□□□ -0.91
RNF4-216ENST00000511859 HCP5Q6MZN7 132 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 FAM122BQ7Z309 247 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 NAA40Q86UY6 237 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 CYP4Z1Q86W10 505 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 C11orf53Q8IXP5 236 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 SDR9C7Q8NEX9 313 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 OR52J3Q8NH60 311 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 MUC7Q8TAX7 377 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 DUS3LQ96G46 650 aaKnown RBP9.35□□□□□ -0.91
RNF4-216ENST00000511859 MED30Q96HR3 178 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 PRRC1Q96M27 445 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 ZNF570Q96NI8 536 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 OR5M11Q96RB7 305 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 IL1RAPQ9NPH3 570 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 INPP5EQ9NRR6 644 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 VSX1Q9NZR4 365 aaPredicted RBP9.35□□□□□ -0.91
RNF4-216ENST00000511859 PITPNC1Q9UKF7 332 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 TSSC4Q9Y5U2 329 aaPredicted RBP9.35□□□□□ -0.91
RNF4-216ENST00000511859 EFCAB9A8MZ26 197 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 H0YAE9 185 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 FKBP6O75344 327 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 TIPRLO75663 272 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 RAP2AP10114 183 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 AMY2BP19961 511 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 POU1F1P28069 291 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 NAA10P41227 235 aaPredicted RBP9.34□□□□□ -0.91
RNF4-216ENST00000511859 TPTEP56180 551 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 LGALS4P56470 323 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 ELF3P78545 371 aaPredicted RBP9.34□□□□□ -0.91
RNF4-216ENST00000511859 ZNF92Q03936 586 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 ARSJQ5FYB0 599 aaPredicted RBP9.34□□□□□ -0.91
RNF4-216ENST00000511859 FGD3Q5JSP0 725 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 GPR139Q6DWJ6 353 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 CORO6Q6QEF8 472 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 NRMQ8IXM6 262 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 RNF113BQ8IZP6 322 aaKnown RBP9.34□□□□□ -0.91
RNF4-216ENST00000511859 LRRC29Q8WV35 223 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 PYDC1Q8WXC3 89 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 PITX2Q99697 317 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 ATF6BQ99941 703 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 CHID1Q9BWS9 393 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 NDEL1Q9GZM8 345 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 NUAK2Q9H093 628 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 MAGIXQ9H6Y5 334 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 SLC25A10Q9UBX3 287 aaPredicted RBP9.34□□□□□ -0.91
RNF4-216ENST00000511859 TCF19Q9Y242 345 aa9.34□□□□□ -0.91
RNF4-216ENST00000511859 HUWE1Q7Z6Z7 4374 aaKnown RBP9.33□□□□□ -0.92
RNF4-216ENST00000511859 LCE6AA0A183 80 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 TCRBV4S1A1TA0A5B7 111 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 RRP9O43818 475 aaKnown RBP9.33□□□□□ -0.92
RNF4-216ENST00000511859 CST1P01037 141 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 H1F0P07305 194 aaKnown RBP9.33□□□□□ -0.92
RNF4-216ENST00000511859 RHCEP18577 417 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 PAX6P26367 422 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 CRABP1P29762 137 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 SDHAP31040 664 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 RRM2P31350 389 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 VDAC2P45880 294 aaPredicted RBP9.33□□□□□ -0.92
RNF4-216ENST00000511859 CENPAP49450 140 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 CAV3P56539 151 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 ACTR3P61158 418 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 ZBED5Q49AG3 693 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 STUMQ69YW2 141 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 TBPL2Q6SJ96 375 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 UNQ9370/PRO34162Q6UXP9 181 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 OR8S1Q8NH09 359 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 MCRIP2Q9BUT9 160 aaKnown RBP9.33□□□□□ -0.92
RNF4-216ENST00000511859 HEXA-AS1Q9H8Q6 139 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 VNN3Q9NY84 501 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 HAO2Q9NYQ3 351 aa9.33□□□□□ -0.92
RNF4-216ENST00000511859 TRBV4-1A0A0J9YWV2 114 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.32□□□□□ -0.92
RNF4-216ENST00000511859 GNGT2O14610 69 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 SYNGR1O43759 233 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 GADD45GO95257 159 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 DDOSTP39656 456 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 MAGEA2P43356 314 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 KRR1Q13601 381 aaKnown RBP9.32□□□□□ -0.92
RNF4-216ENST00000511859 TRAM2Q15035 370 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 MEP1BQ16820 701 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 DMRTC1Q5HYR2 192 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 DNM1P34Q6PK57 102 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 WDR82Q6UXN9 313 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 ZNF788Q6ZQV5 615 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 TMPRSS11FQ6ZWK6 438 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 DPY19L4Q7Z388 723 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 CENPVQ7Z7K6 275 aaPredicted RBP9.32□□□□□ -0.92
RNF4-216ENST00000511859 ADCK1Q86TW2 530 aa9.32□□□□□ -0.92
RNF4-216ENST00000511859 OFCC1Q8IZS5 231 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms