RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 MFN2O95140 757 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 VAMP5O95183 116 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 CSTAP01040 98 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 IFNW1P05000 195 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 CCDC159P0C7I6 412 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 RPS2P15880 293 aaKnown RBP4.69□□□□□ -1.66
USP53-206ENST00000510737 CPT2P23786 658 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 MPV17P39210 176 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 CAMK2DQ13557 499 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 LASP1Q14847 261 aaKnown RBP4.69□□□□□ -1.66
USP53-206ENST00000510737 SPIN4Q56A73 249 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 THEM4Q5T1C6 240 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 LCN1P1Q5VSP4 162 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 WDR25Q64LD2 544 aaPredicted RBP4.69□□□□□ -1.66
USP53-206ENST00000510737 CCDC137Q6PK04 289 aaKnown RBP4.69□□□□□ -1.66
USP53-206ENST00000510737 LYPD2Q6UXB3 125 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 SLC25A42Q86VD7 318 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 SPERTQ8NA61 448 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 ICA1LQ8NDH6 482 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 FAM71CQ8NEG0 241 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 ADAMTS16Q8TE57 1224 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 FAM120BQ96EK7 910 aaKnown RBP4.69□□□□□ -1.66
USP53-206ENST00000510737 CHMP6Q96FZ7 201 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 OVOL2Q9BRP0 275 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 TMEM246Q9BRR3 403 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 SIRPDQ9H106 197 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 HEXA-AS1Q9H8Q6 139 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 Q9N2K0 584 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 NSMCE4AQ9NXX6 385 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 MIOXQ9UGB7 285 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 VPS13DQ5THJ4 4388 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 BTBD17A6NE02 478 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 H0YHG0 523 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 SCN2BO60939 215 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 RAB36O95755 333 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 B4GALT1P15291 398 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 FRKP42685 505 aaPredicted RBP4.68□□□□□ -1.66
USP53-206ENST00000510737 PITPNBP48739 271 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 POLR2HP52434 150 aaKnown RBP4.68□□□□□ -1.66
USP53-206ENST00000510737 FOXA1P55317 472 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 ARF6P62330 175 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 TNFAIP6P98066 277 aaPredicted RBP4.68□□□□□ -1.66
USP53-206ENST00000510737 BNIP2Q12982 314 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 PMS2P3Q13401 168 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 ODF4Q2M2E3 257 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 SPATA46Q5T0L3 261 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 EIF3MQ7L2H7 374 aaKnown RBP4.68□□□□□ -1.66
USP53-206ENST00000510737 TMEM123Q8N131 208 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 PDIK1LQ8N165 341 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 FBXO36Q8NEA4 188 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 SLC30A7Q8NEW0 376 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 OR4C13Q8NGP0 309 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 CYYR1Q96J86 154 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 PLEKHA8Q96JA3 519 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 SAMD8Q96LT4 415 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 OR2M2Q96R28 347 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 NKX3-1Q99801 234 aaPredicted RBP4.68□□□□□ -1.66
USP53-206ENST00000510737 BCL2L14Q9BZR8 327 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 EDA2RQ9HAV5 297 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 RASD1Q9Y272 281 aa4.68□□□□□ -1.66
USP53-206ENST00000510737 A0A1B0GW55 424 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 CLDN24A6NM45 220 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 G3V2L1 256 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 ENSAO43768 121 aaKnown RBP4.67□□□□□ -1.66
USP53-206ENST00000510737 UBL3O95164 117 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 OTCP00480 354 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 C2P06681 752 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 FBP1P09467 338 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 DUX4L2P0CJ85 424 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 DUX4L3P0CJ86 424 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 DUX4L5P0CJ88 424 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 DUX4L6P0CJ89 424 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 DUX4L7P0CJ90 424 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 CRABP2P29373 138 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 SSTR1P30872 391 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 HSD17B3P37058 310 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 MNDAP41218 407 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 PRB3Q04118 309 aaPredicted RBP4.67□□□□□ -1.66
USP53-206ENST00000510737 ILF2Q12905 390 aaKnown RBP4.67□□□□□ -1.66
USP53-206ENST00000510737 IRF3Q14653 427 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 LY6EQ16553 131 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 FAM83EQ2M2I3 478 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 FAM201AQ5SY85 155 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 TEX38Q6PEX7 206 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 DUX4L9Q6RFH8 374 aaPredicted RBP4.67□□□□□ -1.66
USP53-206ENST00000510737 PIWIL3Q7Z3Z3 882 aaKnown RBP4.67□□□□□ -1.66
USP53-206ENST00000510737 C20orf196Q8IYI0 205 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 KLHL30-AS1Q8NEE0 82 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 OR5D16Q8NGK9 328 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 SLC25A40Q8TBP6 338 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 CCDC107Q8WV48 283 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 OR7D2Q96RA2 312 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 CPNE1Q99829 537 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 TUBB1Q9H4B7 451 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 RNF121Q9H920 327 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 CDH20Q9HBT6 801 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 ZCCHC3Q9NUD5 404 aaKnown RBP4.67□□□□□ -1.66
USP53-206ENST00000510737 DUX4Q9UBX2 424 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 CLN8Q9UBY8 286 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 POFUT2Q9Y2G5 429 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms