RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 BLMHQ13867 455 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 HABP2Q14520 560 aaPredicted RBP13□□□□□ -0.33
CXCL1-202ENST00000509101 GFOD2Q3B7J2 385 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 FOXB2Q5VYV0 432 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 C11orf87Q6NUJ2 197 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 ZNF788Q6ZQV5 615 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 DUS3LQ96G46 650 aaKnown RBP13□□□□□ -0.33
CXCL1-202ENST00000509101 AJUBAQ96IF1 538 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 RAB3IPQ96QF0 476 aaPredicted RBP13□□□□□ -0.33
CXCL1-202ENST00000509101 DNTTIP1Q9H147 329 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 TLNRD1Q9H1K6 362 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 V9GYQ6 96 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 hCG_38984A0A1B0GV85 526 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 MEGF11A6BM72 1044 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 SLC22A2O15244 555 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 SIGLEC5O15389 551 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 AKR7A2O43488 359 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 SNX3O60493 162 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 GADD45GO95257 159 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 MPIG6BO95866 241 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 COX4I1P13073 169 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 ENTPD1P49961 510 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 MXRA7P84157 204 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 KLHL12Q53G59 568 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 FAM185AQ8N0U4 392 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 OR4F17Q8NGA8 305 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 OR2T4Q8NH00 348 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 ANGPTL6Q8NI99 470 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 RP9Q8TA86 221 aaKnown RBP12.99□□□□□ -0.33
CXCL1-202ENST00000509101 RPL3LQ92901 407 aaKnown RBP12.99□□□□□ -0.33
CXCL1-202ENST00000509101 MED30Q96HR3 178 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 OR4F4Q96R69 305 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 MICU1Q9BPX6 476 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 MYLK2Q9H1R3 596 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 ZNF702PQ9H963 129 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 RHBDD3Q9Y3P4 386 aa12.99□□□□□ -0.33
CXCL1-202ENST00000509101 DNAH9Q9NYC9 4486 aa12.98□□□□□ -0.33
CXCL1-202ENST00000509101 CCDC22O60826 627 aa12.98□□□□□ -0.33
CXCL1-202ENST00000509101 GSSP48637 474 aa12.98□□□□□ -0.33
CXCL1-202ENST00000509101 CAV3P56539 151 aa12.98□□□□□ -0.33
CXCL1-202ENST00000509101 EMX1Q04741 257 aaPredicted RBP12.98□□□□□ -0.33
CXCL1-202ENST00000509101 NDUFA11Q86Y39 141 aa12.98□□□□□ -0.33
CXCL1-202ENST00000509101 OR5D13Q8NGL4 314 aa12.98□□□□□ -0.33
CXCL1-202ENST00000509101 OR10Z1Q8NGY1 313 aa12.98□□□□□ -0.33
CXCL1-202ENST00000509101 SGK3Q96BR1 496 aa12.98□□□□□ -0.33
CXCL1-202ENST00000509101 RTL8AQ9BWD3 113 aa12.98□□□□□ -0.33
CXCL1-202ENST00000509101 MEGF9Q9H1U4 602 aa12.98□□□□□ -0.33
CXCL1-202ENST00000509101 EGLN3Q9H6Z9 239 aa12.98□□□□□ -0.33
CXCL1-202ENST00000509101 DNAJC27Q9NZQ0 273 aa12.98□□□□□ -0.33
CXCL1-202ENST00000509101 SAMD4AQ9UPU9 718 aaKnown RBP12.98□□□□□ -0.33
CXCL1-202ENST00000509101 ANXA2P2A6NMY6 339 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 ADARB2-AS1A8MUL3 147 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 GYPBP06028 91 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 VSIG8P0DPA2 414 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 HSD11B1P28845 292 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 GABRA2P47869 451 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 GSK3AP49840 483 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 GRB2P62993 217 aaKnown RBP12.97□□□□□ -0.33
CXCL1-202ENST00000509101 IL5RAQ01344 420 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 AANATQ16613 207 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 C8orf82Q6P1X6 216 aaPredicted RBP12.97□□□□□ -0.33
CXCL1-202ENST00000509101 LIAT1Q6ZQX7 453 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 KCTD8Q6ZWB6 473 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 FAM57BQ71RH2 274 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 CPLX4Q7Z7G2 160 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 MKXQ8IYA7 352 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 ZNF511Q8NB15 262 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 TMEM185AQ8NFB2 350 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 OR52L1Q8NGH7 329 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 DDOQ99489 341 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 CITED2Q99967 270 aaPredicted RBP12.97□□□□□ -0.33
CXCL1-202ENST00000509101 HOPXQ9BPY8 73 aaPredicted RBP12.97□□□□□ -0.33
CXCL1-202ENST00000509101 SERTAD4Q9NUC0 356 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 NLKQ9UBE8 527 aa12.97□□□□□ -0.33
CXCL1-202ENST00000509101 DHRS12A0PJE2 317 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 ZNF593O00488 134 aaPredicted RBP12.96□□□□□ -0.33
CXCL1-202ENST00000509101 ACAA1P09110 424 aaPredicted RBP12.96□□□□□ -0.33
CXCL1-202ENST00000509101 FMO3P31513 532 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 SMIM11AP58511 58 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 TSPAN31Q12999 210 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 PRDX4Q13162 271 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 PLA1AQ53H76 456 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 GLYATQ6IB77 296 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 PIGWQ7Z7B1 504 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 SLC37A3Q8NCC5 494 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 ZNRF1Q8ND25 227 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 CSNK2A3Q8NEV1 391 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 PIFOQ8TCI5 191 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 FGF23Q9GZV9 251 aaPredicted RBP12.96□□□□□ -0.33
CXCL1-202ENST00000509101 BRD7Q9NPI1 651 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 DCAF13Q9NV06 445 aaKnown RBP12.96□□□□□ -0.33
CXCL1-202ENST00000509101 CDH10Q9Y6N8 788 aa12.96□□□□□ -0.33
CXCL1-202ENST00000509101 TRBV23-1A0A0A0MS06 115 aa12.95□□□□□ -0.34
CXCL1-202ENST00000509101 TMEM210A6NLX4 147 aa12.95□□□□□ -0.34
CXCL1-202ENST00000509101 OR2AT4A6NND4 320 aa12.95□□□□□ -0.34
CXCL1-202ENST00000509101 ZNF850A8MQ14 1090 aa12.95□□□□□ -0.34
CXCL1-202ENST00000509101 K7EIL1 84 aa12.95□□□□□ -0.34
CXCL1-202ENST00000509101 IGLL1P15814 213 aa12.95□□□□□ -0.34
CXCL1-202ENST00000509101 CD33P20138 364 aa12.95□□□□□ -0.34
CXCL1-202ENST00000509101 GLRA1P23415 457 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms