RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PBOV1Q9GZY1 135 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 BARX1Q9HBU1 254 aaPredicted RBP9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 DEPPQ9NTK1 212 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 IL17BQ9UHF5 180 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 PCDHGA1Q9Y5H4 931 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 CACNA1AO00555 2505 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 TRBV6-7A0A0A0MS04 114 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 RNF222A6NCQ9 220 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 ABCD4O14678 606 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 EFSO43281 561 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 CBR3O75828 277 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 APOC3P02656 99 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 TTRP02766 147 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 ZNF43P17038 809 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 NAT1P18440 290 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 FKBP2P26885 142 aaKnown RBP9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 PSMB6P28072 239 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 LAP3P28838 519 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 MFAP5Q13361 173 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 PPP1R1AQ13522 171 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 PIP4P1Q86T03 277 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 PAQR4Q8N4S7 273 aaPredicted RBP9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 KCNG3Q8TAE7 436 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 TMEM41AQ96HV5 264 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 UCN2Q96RP3 112 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 DMRTA2Q96SC8 542 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 GPR87Q9BY21 358 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 CST11Q9H112 138 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 NCKAP5O14513 1909 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 LRRC3CA6NJW4 275 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 CEACAM18A8MTB9 384 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 TMEM14DPA8MWL7 114 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 C21orf140B9A014 251 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 VSIG8P0DPA2 414 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 TPT1P13693 172 aaKnown RBP9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 ZNF20P17024 532 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 CDAP32320 146 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 CASRP41180 1078 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 CYB561P49447 251 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 LUMP51884 338 aaPredicted RBP9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 CLRN1P58418 232 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 H3F3AP84243 136 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 NKPD1Q17RQ9 610 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 VAX1Q5SQQ9 334 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 SPINK14Q6IE38 97 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 OR10K2Q6IF99 312 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 YRDCQ86U90 279 aaKnown RBP9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 HOGA1Q86XE5 327 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 RELL2Q8NC24 303 aaPredicted RBP9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 NOXO1Q8NFA2 376 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 OR4S1Q8NGB4 309 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 OR2AJ1Q8NGZ0 328 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 C11orf40Q8WZ69 217 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 ZMAT3Q9HA38 289 aaKnown RBP9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 ZNF230Q9UIE0 474 aaPredicted RBP9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 ANAPC10Q9UM13 185 aa9.7□□□□□ -0.86
SH3RF1-203ENST00000508685 PINLYPA6NC86 204 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 DBX1A6NMT0 343 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 OR2AT4A6NND4 320 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 F5H0A9 414 aaPredicted RBP9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 F8VVB4 439 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 F8VWA3 439 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 STMND1H3BQB6 276 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 TNFSF11O14788 317 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 IGHG1P01857 330 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 ZNF93P35789 620 aaPredicted RBP9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 ATP1B3P54709 279 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 SLC35A1P78382 337 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 UNC119Q13432 240 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 ARL6IP1Q15041 203 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 TMEM128Q5BJH2 165 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 NSUN5P2Q63ZY6 315 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 AWAT2Q6E213 333 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 ANGPTL5Q86XS5 388 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 DEFB124Q8NES8 71 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 TMEM185AQ8NFB2 350 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 OR52N4Q8NGI2 321 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 OR52H1Q8NGJ2 320 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 OR4K15Q8NH41 348 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 TERB2Q8NHR7 220 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 ADAMTS17Q8TE56 1095 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 NKD1Q969G9 470 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 FBXW5Q969U6 566 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 OXGR1Q96P68 337 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 GAL3ST1Q99999 423 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 GHRLQ9UBU3 117 aa9.69□□□□□ -0.86
SH3RF1-203ENST00000508685 TEX13DA0A0J9YY54 714 aaPredicted RBP9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 ZNF878C9JN71 531 aa9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 FGF16O43320 207 aa9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 CSN2P05814 226 aa9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 CRHP06850 196 aa9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 NR2C1P13056 603 aa9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 CEACAM1P13688 526 aa9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 ZNF17P17021 662 aa9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 HRH1P35367 487 aa9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 NOVA1P51513 510 aaKnown RBP9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 B3GALT5-AS1P59052 145 aa9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 PPIAP62937 165 aaKnown RBP9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 EIF5AP63241 154 aaKnown RBP9.68□□□□□ -0.86
SH3RF1-203ENST00000508685 ZNF169Q14929 603 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms