RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 MRPL3P09001 348 aaKnown RBP4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ACSM4P0C7M7 580 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ATP6V1B1P15313 513 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 SELEP16581 610 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CCNOP22674 350 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CRHBPP24387 322 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CALCRP30988 508 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 GABARAPL2P60520 117 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 SLC35A2P78381 396 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF85Q03923 595 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ST3GAL4Q11206 333 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 SMN1Q16637 294 aaKnown RBP4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF718Q3SXZ3 478 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF672Q499Z4 452 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CCDC58Q4VC31 144 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF684Q5T5D7 378 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CORO6Q6QEF8 472 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CLEC9AQ6UXN8 241 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 B3GLCTQ6Y288 498 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 PEG10Q86TG7 708 aaKnown RBP4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 STX19Q8N4C7 294 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF283Q8N7M2 679 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF611Q8N823 705 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CCDC54Q8NEL0 328 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 BPIFB6Q8NFQ5 453 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 OR52I1Q8NGK6 324 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 OR10S1Q8NGN2 331 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 OR52N1Q8NH53 320 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 NTN5Q8WTR8 489 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 AKAP1Q92667 903 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 HTRA1Q92743 480 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 GGHQ92820 318 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF799Q96GE5 643 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CNBD2Q96M20 576 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 DOK1Q99704 481 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 DHRS9Q9BPW9 319 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CDCA4Q9BXL8 241 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 DUSP21Q9H596 190 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 AMBNQ9NP70 447 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CENPMQ9NSP4 180 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 SLCO1C1Q9NYB5 712 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CISD1Q9NZ45 108 aaKnown RBP4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 POU2F3Q9UKI9 436 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 IKZF2Q9UKS7 526 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 COPS3Q9UNS2 423 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ERGIC3Q9Y282 383 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CAB39Q9Y376 341 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 GRIP1Q9Y3R0 1128 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CMAHPQ9Y471 501 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 SNX5Q9Y5X3 404 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 DCHS2Q6V1P9 2916 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 CELSR2Q9HCU4 2923 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ITPR2Q14571 2701 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 IGLV3-9A0A075B6K5 115 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 A0A0U1RQV5 110 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 TMEM269A0A1B0GVZ9 245 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 LOC390937A0A1W2PQ73 354 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 TMEM129A0AVI4 362 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 DHRS7CA6NNS2 312 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 B9A039 149 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 ATP6V1G2-DDX39BF2Z307 99 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 PSMD9O00233 223 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 NUDT3O95989 172 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 IGHV3-13P01766 116 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 LCATP04180 440 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 LCKP06239 509 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 CDK1P06493 297 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF250P15622 560 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF12P17014 697 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 GCH1P30793 250 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 TTKP33981 857 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 DDOSTP39656 456 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 RPS27P42677 84 aaKnown RBP4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 TGM4P49221 684 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 CX3CR1P49238 355 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 CCR9P51686 369 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 GBX2P52951 348 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 HCCSP53701 268 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 TAS2R43P59537 309 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 NANOS3P60323 173 aaKnown RBP4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 PPP1CBP62140 327 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 BDH1Q02338 343 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 SNTB2Q13425 540 aaKnown RBP4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 SNTB1Q13884 538 aaKnown RBP4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 EFNB3Q15768 340 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 RSPO1Q2MKA7 263 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 PLAC9Q5JTB6 97 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 AGAP6Q5VW22 663 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 LIPNQ5VXI9 398 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 LAIR2Q6ISS4 152 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 TMEM154Q6P9G4 183 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 LRRN1Q6UXK5 716 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 FBXW12Q6X9E4 464 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 AHSA2Q719I0 299 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 PRSS48Q7RTY5 328 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 MYPOPQ86VE0 399 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 TMEM200AQ86VY9 491 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 FBXL14Q8N1E6 418 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF786Q8N393 782 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms