RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 FAM220BPB1ANY3 271 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 NME4O00746 187 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 SELLP14151 372 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 ANOS1P23352 680 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 GSK3BP49841 420 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 CAV3P56539 151 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 IKZF1Q13422 519 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 BLMHQ13867 455 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 FLOT2Q14254 428 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 SNCBQ16143 134 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 SPATS1Q496A3 300 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 DEFB121Q5J5C9 76 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 ZBTB37Q5TC79 503 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 ZNF788Q6ZQV5 615 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 VTCN1Q7Z7D3 282 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 RNF148Q8N7C7 305 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 OR1M1Q8NGA1 313 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 OR9Q1Q8NGQ5 310 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 OR8S1Q8NH09 359 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 SPSB4Q96A44 273 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 ASB9Q96DX5 294 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 SEH1LQ96EE3 360 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 MED30Q96HR3 178 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 FAM46AQ96IP4 442 aaKnown RBP7.61□□□□□ -1.19
NEDD9-211ENST00000508546 RSRC1Q96IZ7 334 aaKnown RBP7.61□□□□□ -1.19
NEDD9-211ENST00000508546 B9D2Q9BPU9 175 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 WNT10AQ9GZT5 417 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 TLNRD1Q9H1K6 362 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 HAO2Q9NYQ3 351 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 POMPQ9Y244 141 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 A0A1W2PQ09 198 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 WI2-2373I1.2A0A1W2PRP0 233 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 NKX6-3A6NJ46 265 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 ANKRD30BLA7E2S9 258 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 VGLL3A8MV65 326 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 C3orf84H3BNL1 204 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 ARPC3O15145 178 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 XRCC2O43543 280 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 ANGPTL7O43827 346 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 DUS4LO95620 317 aaKnown RBP7.6□□□□□ -1.19
NEDD9-211ENST00000508546 RENP00797 406 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 HSD17B1P14061 328 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 PAICSP22234 425 aaKnown RBP7.6□□□□□ -1.19
NEDD9-211ENST00000508546 NOS3P29474 1203 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 OMPP47874 163 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 CSNK2BP67870 215 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 CD69Q07108 199 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 HABP2Q14520 560 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-211ENST00000508546 DGUOKQ16854 277 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 IFI44LQ53G44 452 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 SMARCD3Q6STE5 483 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 SLC15A3Q8IY34 581 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 CYB561A3Q8NBI2 242 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 OR2T12Q8NG77 320 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 OR5T2Q8NGG2 359 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 OR10Z1Q8NGY1 313 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 DUS3LQ96G46 650 aaKnown RBP7.6□□□□□ -1.19
NEDD9-211ENST00000508546 RCC1LQ96I51 464 aaKnown RBP7.6□□□□□ -1.19
NEDD9-211ENST00000508546 ERMAPQ96PL5 475 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-211ENST00000508546 NMNAT3Q96T66 252 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 DDOQ99489 341 aa7.6□□□□□ -1.19
NEDD9-211ENST00000508546 NKX3-1Q99801 234 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-211ENST00000508546 MRPL22Q9NWU5 206 aaKnown RBP7.6□□□□□ -1.19
NEDD9-211ENST00000508546 SLC25A10Q9UBX3 287 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-211ENST00000508546 TRBV23-1A0A0A0MS06 115 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 A0A1W2PRQ8 180 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 CDIPTO14735 213 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 SIGLEC5O15389 551 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 KRT36O76013 467 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 HLA-DQA2P01906 255 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 HIST1H1CP16403 213 aaKnown RBP7.59□□□□□ -1.19
NEDD9-211ENST00000508546 MSX2P35548 267 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-211ENST00000508546 BMXP51813 675 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 KRTAP10-11P60412 298 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 SLC35A2P78381 396 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 CD83Q01151 205 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 EGFEM1PQ0D2K5 195 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 DGCR6Q14129 220 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 RCN1Q15293 331 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 CNN3Q15417 329 aaKnown RBP7.59□□□□□ -1.19
NEDD9-211ENST00000508546 LNX2Q8N448 690 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 OR4C15Q8NGM1 316 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 ANGPTL6Q8NI99 470 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 GAFA1Q96PS6 74 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 KCTD14Q9BQ13 255 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-211ENST00000508546 PRSS22Q9GZN4 317 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 DCLRE1BQ9H816 532 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 RPRD1BQ9NQG5 326 aaKnown RBP7.59□□□□□ -1.19
NEDD9-211ENST00000508546 CMTM6Q9NX76 183 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 CD300AQ9UGN4 299 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 ZNF391Q9UJN7 358 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 ENPP4Q9Y6X5 453 aa7.59□□□□□ -1.19
NEDD9-211ENST00000508546 OR6C68A6NDL8 312 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 UNC119BA6NIH7 251 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 FAM90A8PA6NJQ4 464 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 E9PQ18 207 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 H0YAE9 185 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 FKBP6O75344 327 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 H1F0P07305 194 aaKnown RBP7.58□□□□□ -1.2
NEDD9-211ENST00000508546 ACAA1P09110 424 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms