RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 TCEANCQ8N8B7 351 aa10.06□□□□□ -0.8
CLDND1-218ENST00000508503 LRTOMTQ8WZ04 291 aa10.06□□□□□ -0.8
CLDND1-218ENST00000508503 C12orf43Q96C57 262 aaKnown RBP10.06□□□□□ -0.8
CLDND1-218ENST00000508503 MNTQ99583 582 aa10.06□□□□□ -0.8
CLDND1-218ENST00000508503 MICU1Q9BPX6 476 aa10.06□□□□□ -0.8
CLDND1-218ENST00000508503 MROQ9BYG7 248 aa10.06□□□□□ -0.8
CLDND1-218ENST00000508503 PRRG3Q9BZD7 231 aa10.06□□□□□ -0.8
CLDND1-218ENST00000508503 COPS3Q9UNS2 423 aa10.06□□□□□ -0.8
CLDND1-218ENST00000508503 SLC22A31A6NKX4 558 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 ANXA2P2A6NMY6 339 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 ZNF850A8MQ14 1090 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 CDIPTO14735 213 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 FGF12P61328 243 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 PRDX4Q13162 271 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 MICBQ29980 383 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 GFOD2Q3B7J2 385 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 ZBTB37Q5TC79 503 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 C12orf54Q6X4T0 127 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 BCDIN3DQ7Z5W3 292 aaKnown RBP10.05□□□□□ -0.8
CLDND1-218ENST00000508503 BOLLQ8N9W6 283 aaKnown RBP10.05□□□□□ -0.8
CLDND1-218ENST00000508503 LY6G5BQ8NDX9 201 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 LRRC29Q8WV35 223 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 HPSE2Q8WWQ2 592 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 PPP1R14AQ96A00 147 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 CENPNQ96H22 339 aaPredicted RBP10.05□□□□□ -0.8
CLDND1-218ENST00000508503 PKP2Q99959 881 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 RTL8AQ9BWD3 113 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 PAPOLGQ9BWT3 736 aaKnown RBP10.05□□□□□ -0.8
CLDND1-218ENST00000508503 OSBPL10Q9BXB5 764 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 MS4A7Q9GZW8 240 aaPredicted RBP10.05□□□□□ -0.8
CLDND1-218ENST00000508503 PBOV1Q9GZY1 135 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 DNTTIP1Q9H147 329 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 RASSF4Q9H2L5 321 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 ZMAT3Q9HA38 289 aaKnown RBP10.05□□□□□ -0.8
CLDND1-218ENST00000508503 ADGRL4Q9HBW9 690 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 NUFIP1Q9UHK0 495 aaKnown RBP10.05□□□□□ -0.8
CLDND1-218ENST00000508503 ENOPH1Q9UHY7 261 aa10.05□□□□□ -0.8
CLDND1-218ENST00000508503 ZNF816-ZNF321PA0A0X1KG74 233 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 hCG_1807616A0A1W2PRN6 198 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 ZNF879B4DU55 563 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 E9PQ18 207 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 PSMD9O00233 223 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 DVL1O14640 695 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 GPR37O15354 613 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 MRPL3P09001 348 aaKnown RBP10.04□□□□□ -0.8
CLDND1-218ENST00000508503 HKR1P10072 659 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 CFPP27918 469 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 POLR2IP36954 125 aaKnown RBP10.04□□□□□ -0.8
CLDND1-218ENST00000508503 MTNR1AP48039 350 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 RIDAP52758 137 aaKnown RBP10.04□□□□□ -0.8
CLDND1-218ENST00000508503 POU4F2Q12837 409 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 CEACAM21Q3KPI0 293 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 WDR38Q5JTN6 314 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 RBMS3Q6XE24 437 aaKnown RBP10.04□□□□□ -0.8
CLDND1-218ENST00000508503 ZNF788Q6ZQV5 615 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 BTN2A1Q7KYR7 527 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 PNLDC1Q8NA58 520 aaKnown RBP10.04□□□□□ -0.8
CLDND1-218ENST00000508503 SCCPDHQ8NBX0 429 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 OR5A2Q8NGI9 324 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 PIGCQ92535 297 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 GCDHQ92947 438 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-218ENST00000508503 RNF170Q96K19 258 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 WDFY2Q96P53 400 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 TECTBQ96PL2 329 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 CNN2Q99439 309 aaKnown RBP10.04□□□□□ -0.8
CLDND1-218ENST00000508503 CIB1Q99828 191 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 GABARAPL3Q9BY60 117 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 SIRPDQ9H106 197 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 OR51I2Q9H344 312 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 CLN6Q9NWW5 311 aa10.04□□□□□ -0.8
CLDND1-218ENST00000508503 H2AFY2Q9P0M6 372 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-218ENST00000508503 SOX21Q9Y651 276 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-218ENST00000508503 CMYA5Q8N3K9 4069 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 IGHV3OR15-7A0A075B7D8 119 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 CENPVL3A0A0U1RRI6 287 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 A0A1B0GTI1 187 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 DNAJC9-AS1A6NH13 148 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 M0R129 80 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 P2RY10O00398 339 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 TMPRSS2O15393 492 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 TTRP02766 147 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 RNASE1P07998 156 aaKnown RBP10.03□□□□□ -0.8
CLDND1-218ENST00000508503 ACTR3P61158 418 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 GNG3P63215 75 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 ELF3P78545 371 aaPredicted RBP10.03□□□□□ -0.8
CLDND1-218ENST00000508503 EGR3Q06889 387 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 RIPPLY1Q0D2K3 151 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 TMED1Q13445 227 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 ZNF684Q5T5D7 378 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 TMEM42Q69YG0 159 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 STUMQ69YW2 141 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 ZNF322Q6U7Q0 402 aaPredicted RBP10.03□□□□□ -0.8
CLDND1-218ENST00000508503 GID4Q8IVV7 300 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 SLC35F2Q8IXU6 374 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 ZDHHC23Q8IYP9 409 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 ELMOD2Q8IZ81 293 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 OR51E1Q8TCB6 317 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 RPL3LQ92901 407 aaKnown RBP10.03□□□□□ -0.8
CLDND1-218ENST00000508503 SEH1LQ96EE3 360 aa10.03□□□□□ -0.8
CLDND1-218ENST00000508503 RAB3IPQ96QF0 476 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms