RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 TPSG1Q9NRR2 321 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 FOXJ2Q9P0K8 574 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 EXOSC1Q9Y3B2 195 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 ASTN1O14525 1302 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 C2CD4DB7Z1M9 353 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 GFYI3L273 518 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 FAM189A1O60320 539 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 ZIC3O60481 467 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 SUPT7LO94864 414 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 MUC1P15941 1255 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 TBPL1P62380 186 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 PSG4Q00888 419 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 IFITM2Q01629 132 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 RSU1Q15404 277 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 ATAD3CQ5T2N8 411 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 ASPHD1Q5U4P2 390 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 TYW3Q6IPR3 259 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 LRRC28Q86X40 367 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 OR4S2Q8NH73 311 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 C11orf45Q8TAV5 145 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 TMEM18Q96B42 140 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 SMARCD1Q96GM5 515 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 SCGB3A2Q96PL1 93 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 NEDD4LQ96PU5 975 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 CSF3RQ99062 836 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 C1orf50Q9BV19 199 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 OPTCQ9UBM4 332 aa6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 RBM7Q9Y580 266 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-206ENST00000508170 COL14A1Q05707 1796 aaKnown RBP6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 DISP2A7MBM2 1401 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 WNK3Q9BYP7 1800 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 EVPLLA8MZ36 301 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 SLC17A3O00476 420 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 TAAR5O14804 337 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 TNFRSF13BO14836 293 aaPredicted RBP6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 CHST10O43529 356 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 CD8AP01732 235 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 APOHP02749 345 aaPredicted RBP6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 LOXP28300 417 aaPredicted RBP6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 HSPA9P38646 679 aaKnown RBP6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 FOXG1P55316 489 aaPredicted RBP6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 ERVFRD-1P60508 538 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 RRAS2P62070 204 aaPredicted RBP6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 EMX2Q04743 252 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 UNC119Q13432 240 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 NSDHLQ15738 373 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 TEDDM1Q5T9Z0 273 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 B3GNTL1Q67FW5 361 aaPredicted RBP6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 SLC16A13Q7RTY0 426 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 ZDHHC13Q8IUH4 622 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 SKA2Q8WVK7 121 aaPredicted RBP6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 TOMM40LQ969M1 308 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 TADA1Q96BN2 335 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 MOCOSQ96EN8 888 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 OR8B4Q96RC9 309 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 HES7Q9BYE0 225 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 VCXQ9H320 206 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 LGALS13Q9UHV8 139 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 STUB1Q9UNE7 303 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 KLF12Q9Y4X4 402 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 SNX10Q9Y5X0 201 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 SLIT2O94813 1529 aa6.4□□□□□ -1.38
PDGFRA-206ENST00000508170 BCORQ6W2J9 1755 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 ZNF816-ZNF321PA0A0X1KG74 233 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 PPIHO43447 177 aaKnown RBP6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 RGS14O43566 566 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 CXCL13O43927 109 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 KLF8O95600 359 aaPredicted RBP6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 METTL15P1P0C7V9 234 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 BCKDHAP12694 445 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 SPI1P17947 270 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 TPI1P60174 286 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 FMODQ06828 376 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 HECTD2Q5U5R9 776 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 PLET1Q6UQ28 207 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 EPGNQ6UW88 154 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 MMGT1Q8N4V1 131 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 GBGT1Q8N5D6 347 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 EID2Q8N6I1 236 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 DLX4Q92988 240 aaPredicted RBP6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 STMN2Q93045 179 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 PYURFQ96I23 114 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 ZNF382Q96SR6 550 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 TMEM59Q9BXS4 323 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 SPANXA1Q9NS26 97 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 TRAPPC4Q9Y296 219 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 MYRFQ9Y2G1 1151 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 WIPI2Q9Y4P8 454 aa6.4□□□□□ -1.39
PDGFRA-206ENST00000508170 H3BMQ9 156 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 RNASET2O00584 256 aaKnown RBP6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 MFNGO00587 321 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 CRXO43186 299 aaPredicted RBP6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 FOXH1O75593 365 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 FAM107AO95990 144 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 RPL4P36578 427 aaKnown RBP6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 LTBQ06643 244 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 RIPPLY1Q0D2K3 151 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 TIGITQ495A1 244 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 DLK2Q6UY11 383 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms