RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 NELFAQ9H3P2 528 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 CRLF2Q9HC73 371 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 PPP1R14DQ9NXH3 145 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 FBXL3Q9UKT7 428 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 MOKQ9UQ07 419 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 TMEM5Q9Y2B1 443 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 FN1P02751 2386 aaKnown RBP6.95□□□□□ -1.3
SCN1A-207ENST00000507401 ALPK2Q86TB3 2170 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 A0A096LPE4 126 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 A0A1W2PPZ6 126 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 B9A039 149 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 TLX2O43763 284 aaPredicted RBP6.94□□□□□ -1.3
SCN1A-207ENST00000507401 SELENOFO60613 162 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 NDUFS7O75251 213 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 OR2A4O95047 310 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 OR6A2O95222 327 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 LYPD3O95274 346 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 MPC2O95563 127 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 IGF2P01344 180 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 TP53P04637 393 aaPredicted RBP6.94□□□□□ -1.3
SCN1A-207ENST00000507401 NMBP08949 121 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 UBBP0CG47 229 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 UBCP0CG48 685 aaKnown RBP6.94□□□□□ -1.3
SCN1A-207ENST00000507401 SAGP10523 405 aaPredicted RBP6.94□□□□□ -1.3
SCN1A-207ENST00000507401 NFYAP23511 347 aaPredicted RBP6.94□□□□□ -1.3
SCN1A-207ENST00000507401 APEX1P27695 318 aaKnown RBP6.94□□□□□ -1.3
SCN1A-207ENST00000507401 S100A11P31949 105 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 SERPINF1P36955 418 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 HAAOP46952 286 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 TAS2R43P59537 309 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 RPS27AP62979 156 aaKnown RBP6.94□□□□□ -1.3
SCN1A-207ENST00000507401 UBA52P62987 128 aaKnown RBP6.94□□□□□ -1.3
SCN1A-207ENST00000507401 NAAAQ02083 359 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 PPP1R8Q12972 351 aaKnown RBP6.94□□□□□ -1.3
SCN1A-207ENST00000507401 SEC23BQ15437 767 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 EFNB3Q15768 340 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 GUCA2BQ16661 112 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 GSG1Q2KHT4 349 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 CEACAM16Q2WEN9 425 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 CDNFQ49AH0 187 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 FAM76BQ5HYJ3 339 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 LIPKQ5VXJ0 399 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 C22orf42Q6IC83 251 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 LRFN4Q6PJG9 635 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 VTCN1Q7Z7D3 282 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 STX12Q86Y82 276 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 SVBPQ8N300 66 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 FTMTQ8N4E7 242 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 TOMM5Q8N4H5 51 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 C10orf53Q8N6V4 93 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 NUP37Q8NFH4 326 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 OR2T35Q8NGX2 323 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 OR5J2Q8NH18 312 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 SLC7A13Q8TCU3 470 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 PHYHIPQ92561 330 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 UBE2FQ969M7 185 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 TPD52L3Q96J77 140 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 MOGAT1Q96PD6 335 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 OR2A7Q96R45 310 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 AMBNQ9NP70 447 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 B3GAT2Q9NPZ5 323 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 NANSQ9NR45 359 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 INPP5EQ9NRR6 644 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 CA10Q9NS85 328 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 NUDT15Q9NV35 164 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 COA4Q9NYJ1 87 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 TAS2R5Q9NYW4 299 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 ABRACLQ9P1F3 81 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 COMMD3Q9UBI1 195 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 HIF3AQ9Y2N7 669 aa6.94□□□□□ -1.3
SCN1A-207ENST00000507401 PLSCR5A0PG75 271 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 PCP4L1A6NKN8 68 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 CPSF4LA6NMK7 179 aaKnown RBP6.93□□□□□ -1.3
SCN1A-207ENST00000507401 LRRN3E7EW58 273 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 PRR23D1E9PI22 279 aaPredicted RBP6.93□□□□□ -1.3
SCN1A-207ENST00000507401 M0R3H8 397 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 IMPA2O14732 288 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 CD5LO43866 347 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 SSX5O60225 188 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 OPN1SWP03999 348 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 THY1P04216 161 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 HIST1H2ABP04908 130 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 CECR9P0C854 216 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 PRR23D2P0DMB1 279 aaPredicted RBP6.93□□□□□ -1.3
SCN1A-207ENST00000507401 HLA-DOBP13765 273 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 IFNGR1P15260 489 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 SLC25A16P16260 332 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 SPI1P17947 270 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 PTNP21246 168 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 POU1F1P28069 291 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 RBM34P42696 430 aaKnown RBP6.93□□□□□ -1.3
SCN1A-207ENST00000507401 MECP2P51608 486 aaKnown RBP6.93□□□□□ -1.3
SCN1A-207ENST00000507401 CRYBA2P53672 197 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 TSPAN5P62079 268 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 POU3F1Q03052 451 aaPredicted RBP6.93□□□□□ -1.3
SCN1A-207ENST00000507401 KRTAP1-1Q07627 177 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 LOXL1Q08397 574 aaPredicted RBP6.93□□□□□ -1.3
SCN1A-207ENST00000507401 GK2Q14410 553 aaPredicted RBP6.93□□□□□ -1.3
SCN1A-207ENST00000507401 ZNF74Q16587 644 aa6.93□□□□□ -1.3
SCN1A-207ENST00000507401 RNF212Q495C1 297 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 273.1 ms