RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ALOX5APP20292 161 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 MAP2K3P46734 347 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 ACTR3P61158 418 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 CBX1P83916 185 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 GFOD2Q3B7J2 385 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 FAM76BQ5HYJ3 339 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 ZBTB37Q5TC79 503 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 BRD3OSQ6XYD6 125 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 CPOQ8IVL8 374 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 C11orf53Q8IXP5 236 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 FAM81AQ8TBF8 368 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 ASB17Q8WXJ9 295 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 LRTOMTQ8WZ04 291 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 ST8SIA4Q92187 359 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 TBX15Q96SF7 602 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 MNTQ99583 582 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 SMURF1Q9HCE7 757 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 BRD7Q9NPI1 651 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 DNAJB11Q9UBS4 358 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 ENOPH1Q9UHY7 261 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 RHBDD3Q9Y3P4 386 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 ZNF816-ZNF321PA0A0X1KG74 233 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 CDIPTO14735 213 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 FKBP6O75344 327 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 NDUFA7O95182 113 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 PRDX4Q13162 271 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 SNAPC1Q16533 368 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 WDR38Q5JTN6 314 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 C1orf122Q6ZSJ8 110 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 WDR86Q86TI4 376 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 ZDHHC23Q8IYP9 409 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 SCCPDHQ8NBX0 429 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 LY6G5BQ8NDX9 201 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 ZNF671Q8TAW3 534 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 OR5P3Q8WZ94 311 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 DYRK2Q92630 601 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 RNF170Q96K19 258 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 CLPTM1LQ96KA5 538 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 AMELYQ99218 206 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 DPAGT1Q9H3H5 408 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 HAO2Q9NYQ3 351 aa11.93□□□□□ -0.5
HMGCS1-203ENST00000507004 TCRBV3S1A0A5B6 114 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 OR5B21A6NL26 309 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 DYNC1I1O14576 645 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 SELENOFO60613 162 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 MTRF1O75570 445 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 SFTPBP07988 381 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 MELTFP08582 738 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 ANOS1P23352 680 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 EEF1B2P24534 225 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 TGM4P49221 684 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 ARF6P62330 175 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 ESRRGP62508 458 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 GNG3P63215 75 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 CSNK2BP67870 215 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 BLMHQ13867 455 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 ZNF829Q3KNS6 432 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 STUMQ69YW2 141 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 KCTD8Q6ZWB6 473 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 THAP5Q7Z6K1 395 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 C8orf46Q8TAG6 207 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 PIGCQ92535 297 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 RAB3IPQ96QF0 476 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 CCL13Q99616 98 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 PKP2Q99959 881 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 MOB1AQ9H8S9 216 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 PAPOLBQ9NRJ5 636 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 ZNF319Q9P2F9 582 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 FAM96BQ9Y3D0 163 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 LRP12Q9Y561 859 aa11.92□□□□□ -0.5
HMGCS1-203ENST00000507004 IGHV3OR15-7A0A075B7D8 119 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 TMEM269A0A1B0GVZ9 245 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 BTBD17A6NE02 478 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 FAM181BA6NEQ2 426 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 ZNF850A8MQ14 1090 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 GSC2O15499 205 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 DNAJC8O75937 253 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 KNG1P01042 644 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 FBP1P09467 338 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 SLC2A5P22732 501 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 RASSF2P50749 326 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 CRISP1P54107 249 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 RAG2P55895 527 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 CAV3P56539 151 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 ROM1Q03395 351 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 RIPPLY1Q0D2K3 151 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 NCR3LG1Q68D85 454 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 FIP1L1Q6UN15 594 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 GDPGP1Q6ZNW5 385 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 C17orf107Q6ZR85 190 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 TMEM179BQ7Z7N9 219 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 ZNF679Q8IYX0 411 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 OR8B12Q8NGG6 310 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 OR5A2Q8NGI9 324 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 LHX4Q969G2 390 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 TEAD3Q99594 435 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 DCTN5Q9BTE1 182 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 RASSF4Q9H2L5 321 aa11.91□□□□□ -0.5
HMGCS1-203ENST00000507004 RASL12Q9NYN1 266 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms