RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ZNF724A8MTY0 619 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 B4DEV8 164 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 NME2P1O60361 137 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 CA11O75493 328 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 LY86O95711 162 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 AMY2BP19961 511 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 GALNSP34059 522 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 GPR3P46089 330 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 SPEM2Q0P670 501 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 FUT7Q11130 342 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 ZNF674Q2M3X9 581 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 C1orf140Q5VVS0 124 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 FAM219AQ8IW50 185 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 SGPP2Q8IWX5 399 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 OR52N4Q8NGI2 321 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 BAHD1Q8TBE0 780 aaPredicted RBP14.08□□□□□ -0.15
SCLT1-208ENST00000506368 SLC25A43Q8WUT9 341 aaPredicted RBP14.08□□□□□ -0.15
SCLT1-208ENST00000506368 PIGQQ9BRB3 760 aa14.08□□□□□ -0.15
SCLT1-208ENST00000506368 H7C1Q1 480 aa14.08□□□□□ -0.16
SCLT1-208ENST00000506368 PRH1P02810 166 aa14.08□□□□□ -0.16
SCLT1-208ENST00000506368 ZNF93P35789 620 aaPredicted RBP14.08□□□□□ -0.16
SCLT1-208ENST00000506368 CCR4P51679 360 aa14.08□□□□□ -0.16
SCLT1-208ENST00000506368 ACKR1Q16570 336 aa14.08□□□□□ -0.16
SCLT1-208ENST00000506368 PRSS41Q7RTY9 318 aa14.08□□□□□ -0.16
SCLT1-208ENST00000506368 ZNF101Q8IZC7 436 aa14.08□□□□□ -0.16
SCLT1-208ENST00000506368 BEND2Q8NDZ0 799 aa14.08□□□□□ -0.16
SCLT1-208ENST00000506368 OR13G1Q8NGZ3 307 aa14.08□□□□□ -0.16
SCLT1-208ENST00000506368 DGAT2Q96PD7 388 aa14.08□□□□□ -0.16
SCLT1-208ENST00000506368 APOOQ9BUR5 198 aa14.08□□□□□ -0.16
SCLT1-208ENST00000506368 MOB1AQ9H8S9 216 aa14.08□□□□□ -0.16
SCLT1-208ENST00000506368 THAP10Q9P2Z0 257 aaPredicted RBP14.08□□□□□ -0.16
SCLT1-208ENST00000506368 A0A1B0GWJ7 208 aa14.07□□□□□ -0.16
SCLT1-208ENST00000506368 A6NIZ1 184 aa14.07□□□□□ -0.16
SCLT1-208ENST00000506368 RAP1BP61224 184 aa14.07□□□□□ -0.16
SCLT1-208ENST00000506368 RELQ04864 619 aaPredicted RBP14.07□□□□□ -0.16
SCLT1-208ENST00000506368 ELOBQ15370 118 aa14.07□□□□□ -0.16
SCLT1-208ENST00000506368 CST6Q15828 149 aa14.07□□□□□ -0.16
SCLT1-208ENST00000506368 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.07□□□□□ -0.16
SCLT1-208ENST00000506368 C9orf40Q8IXQ3 194 aa14.07□□□□□ -0.16
SCLT1-208ENST00000506368 TMEFF1Q8IYR6 380 aa14.07□□□□□ -0.16
SCLT1-208ENST00000506368 FGGYQ96C11 551 aa14.07□□□□□ -0.16
SCLT1-208ENST00000506368 MEGF10Q96KG7 1140 aa14.07□□□□□ -0.16
SCLT1-208ENST00000506368 RBM14Q96PK6 669 aaKnown RBP14.07□□□□□ -0.16
SCLT1-208ENST00000506368 CA14Q9ULX7 337 aa14.07□□□□□ -0.16
SCLT1-208ENST00000506368 KCNIP3Q9Y2W7 256 aa14.07□□□□□ -0.16
SCLT1-208ENST00000506368 HIST1H2BKO60814 126 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 IL33O95760 270 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 HIST1H2BJP06899 126 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 CTSDP07339 412 aaPredicted RBP14.06□□□□□ -0.16
SCLT1-208ENST00000506368 HIST1H2BOP23527 126 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 HIST1H2BBP33778 126 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 SEC13P55735 322 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 HIST1H2BDP58876 126 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 HIST1H2BCP62807 126 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 IL13RA2Q14627 380 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 HIST2H2BEQ16778 126 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.06□□□□□ -0.16
SCLT1-208ENST00000506368 VITQ6UXI7 678 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 PPP1R3BQ86XI6 285 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 MFSD8Q8NHS3 518 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 C16orf52Q8NHV5 167 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 FAM3CQ92520 227 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 HIST1H2BHQ93079 126 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 HIST1H2BNQ99877 126 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 HIST1H2BMQ99879 126 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 DUSP15Q9H1R2 295 aaPredicted RBP14.06□□□□□ -0.16
SCLT1-208ENST00000506368 OR10A5Q9H207 317 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 NELFAQ9H3P2 528 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 TBC1D29Q9UFV1 150 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 DXOO77932 396 aaKnown RBP14.06□□□□□ -0.16
SCLT1-208ENST00000506368 CTLA4P16410 223 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 HOXA6P31267 233 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 GNALP38405 381 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 ZP2Q05996 745 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 CHAF1BQ13112 559 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 HNF4GQ14541 408 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 KLHL24Q6TFL4 600 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 COX15Q7KZN9 410 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 OR13C9Q8NGT0 318 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 GPBAR1Q8TDU6 330 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 ST7LQ8TDW4 575 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 NTNG2Q96CW9 530 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 TMEM68Q96MH6 324 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 NEU1Q99519 415 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 FBXO7Q9Y3I1 522 aa14.06□□□□□ -0.16
SCLT1-208ENST00000506368 PRSS38A1L453 326 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 K7EQS6 105 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 P2RY10O00398 339 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 CLDN4O14493 209 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 RRP8O43159 456 aaKnown RBP14.05□□□□□ -0.16
SCLT1-208ENST00000506368 H2BFMP0C1H6 154 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 RNH1P13489 461 aaKnown RBP14.05□□□□□ -0.16
SCLT1-208ENST00000506368 CD226Q15762 336 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 SLC35E3Q7Z769 313 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 RHOVQ96L33 236 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 TMEM59Q9BXS4 323 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 HIPK2Q9H2X6 1198 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 TMEM242Q9NWH2 141 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 MRPS28Q9Y2Q9 187 aaKnown RBP14.05□□□□□ -0.16
SCLT1-208ENST00000506368 PUS1Q9Y606 427 aaKnown RBP eCLIP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms