RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 GCNT6Q5T4J0 391 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 ATPAF1Q5TC12 328 aaPredicted RBP5.55□□□□□ -1.52
VCAN-206ENST00000505615 STUMQ69YW2 141 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 MSANTD1Q6ZTZ1 278 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 SLC36A1Q7Z2H8 476 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 WDR86Q86TI4 376 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 ARMC8Q8IUR7 673 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 MSRB3Q8IXL7 192 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 C11orf53Q8IXP5 236 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 MKXQ8IYA7 352 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 LRRC75AQ8NAA5 344 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 SMYD1Q8NB12 490 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 OR4X2Q8NGF9 303 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 H1FXQ92522 213 aaKnown RBP5.55□□□□□ -1.52
VCAN-206ENST00000505615 GTF2H4Q92759 462 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 RNF125Q96EQ8 232 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 DUS3LQ96G46 650 aaKnown RBP5.55□□□□□ -1.52
VCAN-206ENST00000505615 ITCHQ96J02 903 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 SNX22Q96L94 193 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 SORT1Q99523 831 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 ZNF649Q9BS31 505 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 ADI1Q9BV57 179 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 EVA1AQ9H8M9 152 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 KCNK9Q9NPC2 374 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 PNPOQ9NVS9 261 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 SLC25A37Q9NYZ2 338 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 ADA2Q9NZK5 511 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 SMIM23A6NLE4 172 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 CD300LBA8K4G0 201 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 GMDSO60547 372 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 TK1P04183 234 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 ACSM4P0C7M7 580 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 CTLA4P16410 223 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 PAICSP22234 425 aaKnown RBP5.54□□□□□ -1.52
VCAN-206ENST00000505615 CASQ1P31415 396 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 ALDH3A2P51648 485 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 RPL11P62913 178 aaKnown RBP5.54□□□□□ -1.52
VCAN-206ENST00000505615 HIST1H3AP68431 136 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 FHL1Q13642 323 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 DUSP7Q16829 419 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 DGUOKQ16854 277 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 ALG10Q5BKT4 473 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 LRRC10Q5BKY1 277 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 HIST2H3PS2Q5TEC6 136 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 HIST2H3AQ71DI3 136 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 CPLX4Q7Z7G2 160 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 CENPVQ7Z7K6 275 aaPredicted RBP5.54□□□□□ -1.52
VCAN-206ENST00000505615 NKAIN4Q8IVV8 208 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 C11orf42Q8N5U0 333 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 OR51D1Q8NGF3 324 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 OR5D13Q8NGL4 314 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 RPS4Y2Q8TD47 263 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 TMEM255BQ8WV15 326 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 LRRC29Q8WV35 223 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 SGTBQ96EQ0 304 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 GAFA1Q96PS6 74 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 ZBTB18Q99592 522 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 COQ7Q99807 217 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 JAM3Q9BX67 310 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 SLC22A4Q9H015 551 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 IKZF5Q9H5V7 419 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 RNPEPL1Q9HAU8 725 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 ELL3Q9HB65 397 aaPredicted RBP5.54□□□□□ -1.52
VCAN-206ENST00000505615 ERVK13-1Q9NX77 482 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 VSX1Q9NZR4 365 aaPredicted RBP5.54□□□□□ -1.52
VCAN-206ENST00000505615 HAO1Q9UJM8 370 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 PYCARDQ9ULZ3 195 aa5.54□□□□□ -1.52
VCAN-206ENST00000505615 NOP16Q9Y3C1 178 aaKnown RBP5.54□□□□□ -1.52
VCAN-206ENST00000505615 TEX13CA0A0J9YWL9 993 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 A0A1W2PQ09 198 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 A6NIZ1 184 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 UBE2CO00762 179 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 SPAG7O75391 227 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 GRPP07492 148 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 MYCNOSP40205 109 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 VEGFCP49767 419 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 GSK3BP49841 420 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 CAV3P56539 151 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 CTXN1P60606 82 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 ABCE1P61221 599 aaKnown RBP5.53□□□□□ -1.52
VCAN-206ENST00000505615 RAP1BP61224 184 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 RPS16P62249 146 aaKnown RBP5.53□□□□□ -1.52
VCAN-206ENST00000505615 LSM6P62312 80 aaKnown RBP5.53□□□□□ -1.52
VCAN-206ENST00000505615 RPL23AP62750 156 aaKnown RBP5.53□□□□□ -1.52
VCAN-206ENST00000505615 RAP1AP62834 184 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 CSNK2BP67870 215 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 CKAP4Q07065 602 aaKnown RBP5.53□□□□□ -1.52
VCAN-206ENST00000505615 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.53□□□□□ -1.52
VCAN-206ENST00000505615 ECH1Q13011 328 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 C6orf10Q5SRN2 563 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 WDR82Q6UXN9 313 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 ZNF788Q6ZQV5 615 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 OR2W3Q7Z3T1 314 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 OR5T2Q8NGG2 359 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 OR52H1Q8NGJ2 320 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 OR9Q1Q8NGQ5 310 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 OR9I1Q8NGQ6 314 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 SPRYD4Q8WW59 207 aaPredicted RBP5.53□□□□□ -1.52
VCAN-206ENST00000505615 SLCO4A1Q96BD0 722 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 C12orf43Q96C57 262 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms