RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 PRR20BP86481 221 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 PRR20AP86496 221 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 ZNF273Q14593 569 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 KCNMB1Q16558 191 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 SRSF7Q16629 238 aaKnown RBP eCLIP9.84□□□□□ -0.83
LSM6-204ENST00000504181 ZNF770Q6IQ21 691 aaPredicted RBP9.84□□□□□ -0.83
LSM6-204ENST00000504181 MAVSQ7Z434 540 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 OR13D1Q8NGV5 346 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 OR8U1Q8NH10 309 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 NDNFQ8TB73 568 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 SPATA25Q9BR10 227 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 TXLNGYQ9BZA5 131 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 IKZF5Q9H5V7 419 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 PNPOQ9NVS9 261 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 SLAMF8Q9P0V8 285 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 LINC00527Q9UJ94 153 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 M0R135 149 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 OR5F1O95221 314 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 GP9P14770 177 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 IDO1P14902 403 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 GNALP38405 381 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 SLC9A3P48764 834 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 FHL1Q13642 323 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 RFX4Q33E94 735 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 TMPRSS11FQ6ZWK6 438 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 OR11H6Q8NGC7 330 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 OR10Z1Q8NGY1 313 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 RPL3LQ92901 407 aaKnown RBP9.83□□□□□ -0.84
LSM6-204ENST00000504181 BPIFA2Q96DR5 249 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 ZNF799Q96GE5 643 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 RBM14Q96PK6 669 aaKnown RBP9.83□□□□□ -0.84
LSM6-204ENST00000504181 TLNRD1Q9H1K6 362 aa9.83□□□□□ -0.84
LSM6-204ENST00000504181 AHCYL1O43865 530 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 OR2F2O95006 317 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 IFNA6P05013 189 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 IGHV1-8P0DP01 117 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 PSG2P11465 335 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 SPNP16150 400 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 MDH1P40925 334 aaKnown RBP9.82□□□□□ -0.84
LSM6-204ENST00000504181 SLC1A6P48664 564 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 INSL3P51460 131 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 PIN1Q13526 163 aaPredicted RBP9.82□□□□□ -0.84
LSM6-204ENST00000504181 KRR1Q13601 381 aaKnown RBP9.82□□□□□ -0.84
LSM6-204ENST00000504181 SLC18B1Q6NT16 456 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 OAFQ86UD1 273 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 OR6V1Q8N148 313 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 OR13C2Q8NGS9 318 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 OR2T27Q8NH04 317 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 CHPT1Q8WUD6 406 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 STMN2Q93045 179 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 NUAK2Q9H093 628 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 DCLRE1BQ9H816 532 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 PNRC2Q9NPJ4 139 aaKnown RBP9.82□□□□□ -0.84
LSM6-204ENST00000504181 ZIM2Q9NZV7 527 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 VAPAQ9P0L0 249 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 RIMS3Q9UJD0 308 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 ZNF222Q9UK12 451 aa9.82□□□□□ -0.84
LSM6-204ENST00000504181 MEX3AA1L020 520 aaKnown RBP9.81□□□□□ -0.84
LSM6-204ENST00000504181 C17orf98A8MV24 154 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 IGHV4-30-4P0DP06 118 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 PIPP12273 146 aaPredicted RBP9.81□□□□□ -0.84
LSM6-204ENST00000504181 TNFRSF1BP20333 461 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 PPIBP23284 216 aaKnown RBP9.81□□□□□ -0.84
LSM6-204ENST00000504181 GLRA1P23415 457 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 LRIF1Q5T3J3 769 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 PGM2L1Q6PCE3 622 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 FAM122BQ7Z309 247 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 SLC26A7Q8TE54 656 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 UBLCP1Q8WVY7 318 aaPredicted RBP9.81□□□□□ -0.84
LSM6-204ENST00000504181 TSSK2Q96PF2 358 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 KRTAP4-5Q9BYR2 181 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 YY1AP1Q9H869 796 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 TBC1D23Q9NUY8 699 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 KCNG2Q9UJ96 466 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 N6AMT1Q9Y5N5 214 aa9.81□□□□□ -0.84
LSM6-204ENST00000504181 TLDC2A0PJX2 215 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 DCTN6O00399 190 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 TYROBPO43914 113 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 RPLP1P05386 114 aaKnown RBP9.8□□□□□ -0.84
LSM6-204ENST00000504181 CD14P08571 375 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 GPX2P18283 190 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 DLX6P56179 175 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 SLC35B1P78383 322 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 KIR2DS1Q14954 304 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 MINOS1Q5TGZ0 78 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 AGBL2Q5U5Z8 902 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 C11orf65Q8NCR3 313 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 OR2AJ1Q8NGZ0 328 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 TAMM41Q96BW9 452 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 PPCSQ9HAB8 311 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 ISYNA1Q9NPH2 558 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 HAO1Q9UJM8 370 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 PYCARDQ9ULZ3 195 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 MINOS1-NBL1R4GNA1 71 aa9.8□□□□□ -0.84
LSM6-204ENST00000504181 PKHD1P08F94 4074 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 SERPINE3A8MV23 424 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 EFCAB9A8MZ26 197 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 EVPLLA8MZ36 301 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 SOCS2O14508 198 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 SLC2A1P11166 492 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms