RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 FZD6O60353 706 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 ZNF354AO60765 605 aaPredicted RBP5.31□□□□□ -1.56
USF3-204ENST00000496826 VDAC1P21796 283 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 SHBQ15464 509 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 TGIF2LYQ8IUE0 185 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 FAM57AQ8TBR7 257 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 AKIP1Q9NQ31 210 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 MMP26Q9NRE1 261 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 KIR2DS5A0A0G2JLQ3 304 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 A0A0G2JNG1 304 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 KIR2DS3K7RE56 304 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 OGG1O15527 345 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 LILRA1O75019 489 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 TSPAN12O95859 305 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 RARRES1P49788 294 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 KIR2DS5Q14953 304 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 Q6ZTK2 550 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 ZNF765Q7L2R6 523 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 OR5A1Q8NGJ0 315 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 OR2Y1Q8NGV0 311 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 ZNF480Q8WV37 535 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 TXNDC17Q9BRA2 123 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 PLSCR3Q9NRY6 295 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 THSD1Q9NS62 852 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 TPRP12270 2363 aaKnown RBP5.31□□□□□ -1.56
USF3-204ENST00000496826 RP1P56715 2156 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 CDK13Q14004 1512 aaKnown RBP5.31□□□□□ -1.56
USF3-204ENST00000496826 MOSPD3O75425 235 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 CLDN7O95471 211 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 CALCBP10092 127 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 CD8BP10966 210 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 CD37P11049 281 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 FBLN1P23142 703 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 FPR3P25089 353 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 MFAP5Q13361 173 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 GGTLC2Q14390 218 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 ODF4Q2M2E3 257 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 FBXO48Q5FWF7 155 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 FCRLAQ7L513 359 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 CA13Q8N1Q1 262 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 WDTC1Q8N5D0 677 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 RXFP4Q8TDU9 374 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 KLF13Q9Y2Y9 288 aaPredicted RBP5.31□□□□□ -1.56
USF3-204ENST00000496826 PPM1DO15297 605 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 PF4V1P10720 104 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 SPANXN4Q5MJ08 99 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 LCN15Q6UWW0 184 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 DLEU7Q6UYE1 221 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 ACVR1CQ8NER5 493 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 OR5H6Q8NGV6 325 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 ZNF502Q8TBZ5 544 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 SLAMF6Q96DU3 332 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 SLC35A4Q96G79 324 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 SOSTQ9BQB4 213 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 HEXA-AS1Q9H8Q6 139 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 KDM5BQ9UGL1 1544 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 CLEC2LP0C7M8 214 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 WNT4P56705 351 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 GPNMBQ14956 572 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 POM121L1PQ3SYA9 428 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 CYHR1Q6ZMK1 362 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 DCBLD1Q8N8Z6 715 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 RCC1LQ96I51 464 aaKnown RBP5.3□□□□□ -1.56
USF3-204ENST00000496826 SLX1AQ9BQ83 275 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 SYT17Q9BSW7 474 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 DUSP21Q9H596 190 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 ASB1Q9Y576 335 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 MYH6P13533 1939 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 LOC285095A0A1B0GVY8 99 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 MAFO75444 373 aaPredicted RBP5.3□□□□□ -1.56
USF3-204ENST00000496826 EPHA8P29322 1005 aaPredicted RBP5.3□□□□□ -1.56
USF3-204ENST00000496826 DCXRQ7Z4W1 244 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 ETFBKMTQ8IXQ9 262 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 OR1L8Q8NGR8 309 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 SLC25A40Q8TBP6 338 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 OARD1Q9Y530 152 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 SYNJ1O43426 1573 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 TRAV20A0A0B4J274 112 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 IQCF5A8MTL0 148 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 EEDO75530 441 aaKnown RBP5.3□□□□□ -1.56
USF3-204ENST00000496826 GBAP04062 536 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 RPS4Y1P22090 263 aaKnown RBP5.3□□□□□ -1.56
USF3-204ENST00000496826 PNLIPRP2P54317 469 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 IER5LQ5T953 404 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 AAED1Q7RTV5 226 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 C10orf82Q8WW14 230 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 DOK1Q99704 481 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 DEFB129Q9H1M3 183 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 ANAPC10Q9UM13 185 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 COL17A1Q9UMD9 1497 aaPredicted RBP5.3□□□□□ -1.56
USF3-204ENST00000496826 ZNF609O15014 1411 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 TMEM269A0A1B0GVZ9 245 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 SLC17A2O00624 439 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 SOWAHAQ2M3V2 549 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 RHBDD2Q6NTF9 364 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 SIAH3Q8IW03 269 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 ZDHHC22Q8N966 263 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 OR10AC1Q8NH08 325 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 OR5W2Q8NH69 310 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 LHFPL5Q8TAF8 219 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms