RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, human

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CXCL12-208	ENST00000496375	PRSS12	P56730	875 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	GNB2	P62879	340 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	ZNF92	Q03936	586 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	BAMBI	Q13145	260 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	PGAP1	Q75T13	922 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	KRT74	Q7RTS7	529 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	EGFL6	Q8IUX8	553 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	TFAP2C	Q92754	450 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	RNFT2	Q96EX2	444 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	TMEM246	Q9BRR3	403 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	ZNF747	Q9BV97	191 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	JAM3	Q9BX67	310 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	MS4A7	Q9GZW8	240 aa	Predicted RBP	12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	MOB1A	Q9H8S9	216 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	ZMAT3	Q9HA38	289 aa	Known RBP	12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	TMEM100	Q9NV29	134 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	FAM206A	Q9NX38	181 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	MIOX	Q9UGB7	285 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	MRM2	Q9UI43	246 aa	Known RBP	12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	PKD1L1	Q8TDX9	2849 aa		12.02	□□□□□ -0.49
CXCL12-208	ENST00000496375	IGHV3OR16-10	A0A075B7F0	116 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	IGHV2-70D	A0A0C4DH43	119 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375		A0A0U1RQV5	110 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	hCG_38984	A0A1B0GV85	526 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375		A0A1W2PQL4	384 aa	Predicted RBP	12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	LRRC30	A6NM36	301 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	IGHA1	P01876	353 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	HLA-DPB1	P04440	258 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	IGHV4-38-2	P0DP08	117 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	SLC2A1	P11166	492 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	CFL1	P23528	166 aa	Known RBP	12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	CPT2	P23786	658 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	RIDA	P52758	137 aa	Known RBP	12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	PAX2	Q02962	417 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	ZNF85	Q03923	595 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	ZNF181	Q2M3W8	571 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	FAM201A	Q5SY85	155 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	BTNL3	Q6UXE8	466 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	SSX6	Q7RTT6	188 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	C1orf87	Q8N0U7	546 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	OR2AE1	Q8NHA4	323 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	CYGB	Q8WWM9	190 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	LGALS12	Q96DT0	336 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	NEIL1	Q96FI4	390 aa	Predicted RBP	12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	ZNF319	Q9P2F9	582 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	AASS	Q9UDR5	926 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	NUFIP1	Q9UHK0	495 aa	Known RBP	12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	MEGF8	Q7Z7M0	2845 aa		12.01	□□□□□ -0.49
CXCL12-208	ENST00000496375	CD300LB	A8K4G0	201 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	WIPF1	O43516	503 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	CLIC3	O95833	236 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	ANXA2	P07355	339 aa	Known RBP	12	□□□□□ -0.49
CXCL12-208	ENST00000496375	RNASE1	P07998	156 aa	Known RBP	12	□□□□□ -0.49
CXCL12-208	ENST00000496375	DDOST	P39656	456 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	PMEL	P40967	661 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	IL5RA	Q01344	420 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	RAB40B	Q12829	278 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	OR8B8	Q15620	311 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	ZNF829	Q3KNS6	432 aa	Predicted RBP	12	□□□□□ -0.49
CXCL12-208	ENST00000496375	ZNF404	Q494X3	552 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	CDON	Q4KMG0	1287 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	SHISA2	Q6UWI4	295 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375		Q6ZSR3	168 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	FAM57B	Q71RH2	274 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	MRPL21	Q7Z2W9	205 aa	Known RBP	12	□□□□□ -0.49
CXCL12-208	ENST00000496375	OR8B12	Q8NGG6	310 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	OR8B3	Q8NGG8	313 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	RAB40A	Q8WXH6	277 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	SLC25A28	Q96A46	364 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	SGK3	Q96BR1	496 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	UPRT	Q96BW1	309 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	OR8B2	Q96RD0	313 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	NR1H4	Q96RI1	486 aa	Predicted RBP	12	□□□□□ -0.49
CXCL12-208	ENST00000496375	ZNF649	Q9BS31	505 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	OR10A2	Q9H208	303 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	INPP5E	Q9NRR6	644 aa		12	□□□□□ -0.49
CXCL12-208	ENST00000496375	MRPL15	Q9P015	296 aa	Known RBP	12	□□□□□ -0.49
CXCL12-208	ENST00000496375	RPL36	Q9Y3U8	105 aa	Known RBP	12	□□□□□ -0.49
CXCL12-208	ENST00000496375	SOX21	Q9Y651	276 aa	Predicted RBP	12	□□□□□ -0.49
CXCL12-208	ENST00000496375	TMPRSS2	O15393	492 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	APOL3	O95236	402 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	FSTL3	O95633	263 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	GNAO1	P09471	354 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	PPIAL4G	P0DN37	164 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	IRF2	P14316	349 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	ATP6V1E1	P36543	226 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	GATA4	P43694	442 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	PITPNB	P48739	271 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	AQP4	P55087	323 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	FAM3A	P98173	230 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	MAB21L1	Q13394	359 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	PLEKHG7	Q6ZR37	379 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	NLRC3	Q7RTR2	1065 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	KCTD20	Q7Z5Y7	419 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	ACBD7	Q8N6N7	88 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	OR10H4	Q8NGA5	316 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	RNF166	Q96A37	237 aa	Predicted RBP	11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	DACT3	Q96B18	629 aa	Predicted RBP	11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms