RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 MAP2K3P46734 347 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 DAPP51397 102 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 ESRRGP62508 458 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 CSNK2BP67870 215 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 IL13RA1P78552 427 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 PTGES3Q15185 160 aaKnown RBP10.55□□□□□ -0.72
PTPRF-214ENST00000496043 FAM76BQ5HYJ3 339 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 ATPAF1Q5TC12 328 aaPredicted RBP10.55□□□□□ -0.72
PTPRF-214ENST00000496043 LCN1P1Q5VSP4 162 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 FAHD1Q6P587 224 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 SHISA2Q6UWI4 295 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 KCTD8Q6ZWB6 473 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 OR8B12Q8NGG6 310 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 OR10Z1Q8NGY1 313 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 FAM81AQ8TBF8 368 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 GATAD2BQ8WXI9 593 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 ASB17Q8WXJ9 295 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 ST8SIA4Q92187 359 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 UTP4Q969X6 686 aaKnown RBP10.55□□□□□ -0.72
PTPRF-214ENST00000496043 C12orf43Q96C57 262 aaKnown RBP10.55□□□□□ -0.72
PTPRF-214ENST00000496043 FAM71F1Q96KD3 344 aaPredicted RBP10.55□□□□□ -0.72
PTPRF-214ENST00000496043 LYZL4Q96KX0 146 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 TBX15Q96SF7 602 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 CADM1Q9BY67 442 aaKnown RBP10.55□□□□□ -0.72
PTPRF-214ENST00000496043 PRRG3Q9BZD7 231 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 HAO2Q9NYQ3 351 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 DNAJB11Q9UBS4 358 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 KLHDC2Q9Y2U9 406 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 LRP12Q9Y561 859 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 TMEM14AQ9Y6G1 99 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 A0A0U1RQV5 110 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 MDFIC2A0A1B0GVS7 189 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 TMEM269A0A1B0GVZ9 245 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 SRRM5B3KS81 715 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 HOXA3O43365 443 aaPredicted RBP10.54□□□□□ -0.72
PTPRF-214ENST00000496043 ZNF254O75437 659 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 ATP6V1B1P15313 513 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 DCTDP32321 178 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 TGM4P49221 684 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 RASSF2P50749 326 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 PSMA6P60900 246 aaKnown RBP10.54□□□□□ -0.72
PTPRF-214ENST00000496043 ACTR3P61158 418 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 BNIP1Q12981 228 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 WDR38Q5JTN6 314 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 Q6YL49 198 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 ZNF679Q8IYX0 411 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 SCCPDHQ8NBX0 429 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 OR5T2Q8NGG2 359 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 RPL3LQ92901 407 aaKnown RBP10.54□□□□□ -0.72
PTPRF-214ENST00000496043 SEH1LQ96EE3 360 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 MED30Q96HR3 178 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 DMRTB1Q96MA1 342 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 PKP2Q99959 881 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 SIRPDQ9H106 197 aa10.54□□□□□ -0.72
PTPRF-214ENST00000496043 RPUSD1Q9UJJ7 312 aaKnown RBP10.54□□□□□ -0.72
PTPRF-214ENST00000496043 NBEAL1Q6ZS30 2694 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 IGHV1-69DA0A0B4J2H0 117 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 ZNF816-ZNF321PA0A0X1KG74 233 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 CCDC182A6NF36 153 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 G3V2T6 193 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-214ENST00000496043 PSMD9O00233 223 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 SPRY1O43609 319 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-214ENST00000496043 FCN3O75636 299 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 ATP5HO75947 161 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 IGHV1-69P01742 117 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 CRYBA1P05813 215 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 MRPL3P09001 348 aaKnown RBP10.53□□□□□ -0.72
PTPRF-214ENST00000496043 RIDAP52758 137 aaKnown RBP10.53□□□□□ -0.72
PTPRF-214ENST00000496043 GMFBP60983 142 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 ROM1Q03395 351 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 RIPPLY1Q0D2K3 151 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 CDONQ4KMG0 1287 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 LRRC10Q5BKY1 277 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 RUSC1-AS1Q66K80 236 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 MEPCEQ7L2J0 689 aaKnown RBP10.53□□□□□ -0.72
PTPRF-214ENST00000496043 KRT74Q7RTS7 529 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 THAP5Q7Z6K1 395 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 ZDHHC23Q8IYP9 409 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 TMEM86BQ8N661 226 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 LY6G5BQ8NDX9 201 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 OR5A2Q8NGI9 324 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 ZNF671Q8TAW3 534 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 LHX4Q969G2 390 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 TMIGD2Q96BF3 282 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 RAB3IPQ96QF0 476 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-214ENST00000496043 PBOV1Q9GZY1 135 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 DNTTIP1Q9H147 329 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 UNKLQ9H9P5 680 aaKnown RBP10.53□□□□□ -0.72
PTPRF-214ENST00000496043 KRT84Q9NSB2 600 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 ACOXLQ9NUZ1 547 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 FAM206AQ9NX38 181 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 KPTNQ9Y664 436 aa10.53□□□□□ -0.72
PTPRF-214ENST00000496043 ZNF732B4DXR9 585 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 AKR7A2O43488 359 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 PRKYO43930 277 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 AMY2BP19961 511 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 FASP25445 335 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 GPM6AP51674 278 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 GNG3P63215 75 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms